RNA–Protein interactions for RNA: ENST00000615573.4

PSD3-220, Transcript of pleckstrin and Sec7 domain containing 3, humanhuman

TSL 5 BASIC

Gene PSD3, Length 5,843 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSD3-220ENST00000615573 NISCHQ9Y2I1 1504 aa14.06□□□□□ -0.16
PSD3-220ENST00000615573 DCAF8L2P0C7V8 631 aa12.87□□□□□ -0.35
PSD3-220ENST00000615573 CCDC180Q9P1Z9 1646 aa12.23□□□□□ -0.45
PSD3-220ENST00000615573 SHROOM4Q9ULL8 1493 aa12.09□□□□□ -0.47
PSD3-220ENST00000615573 SUPT5HO00267 1087 aaKnown RBP12.07□□□□□ -0.48
PSD3-220ENST00000615573 FAM9AQ8IZU1 332 aaPredicted RBP11.96□□□□□ -0.49
PSD3-220ENST00000615573 ABCC9O60706 1549 aa11.73□□□□□ -0.53
PSD3-220ENST00000615573 ZCCHC6Q5VYS8 1495 aaKnown RBP11.73□□□□□ -0.53
PSD3-220ENST00000615573 APLP2Q06481 763 aa11.69□□□□□ -0.54
PSD3-220ENST00000615573 RB1CC1Q8TDY2 1594 aa11.66□□□□□ -0.54
PSD3-220ENST00000615573 NACADO15069 1562 aa11.64□□□□□ -0.55
PSD3-220ENST00000615573 DCAF1Q9Y4B6 1507 aa11.61□□□□□ -0.55
PSD3-220ENST00000615573 TRIM41Q8WV44 630 aa11.54□□□□□ -0.56
PSD3-220ENST00000615573 MYO15BQ96JP2 1530 aa11.44□□□□□ -0.58
PSD3-220ENST00000615573 SCRIBQ14160 1630 aa11.39□□□□□ -0.59
PSD3-220ENST00000615573 ZEB1P37275 1124 aaPredicted RBP11.31□□□□□ -0.6
PSD3-220ENST00000615573 UBTFP17480 764 aaKnown RBP11.26□□□□□ -0.61
PSD3-220ENST00000615573 PABPN1Q86U42 306 aaKnown RBP eCLIP11.23□□□□□ -0.61
PSD3-220ENST00000615573 BAZ1AQ9NRL2 1556 aaPredicted RBP11.14□□□□□ -0.63
PSD3-220ENST00000615573 PELP1Q8IZL8 1130 aaKnown RBP11.1□□□□□ -0.63
PSD3-220ENST00000615573 EHMT2Q96KQ7 1210 aa11.09□□□□□ -0.63
PSD3-220ENST00000615573 CHIC1Q5VXU3 224 aa11.08□□□□□ -0.64
PSD3-220ENST00000615573 ATP1B4Q9UN42 357 aaPredicted RBP11.04□□□□□ -0.64
PSD3-220ENST00000615573 SMARCA2P51531 1590 aa11.03□□□□□ -0.64
PSD3-220ENST00000615573 BAZ1BQ9UIG0 1483 aaKnown RBP11.02□□□□□ -0.65
PSD3-220ENST00000615573 EEA1Q15075 1411 aa11□□□□□ -0.65
PSD3-220ENST00000615573 TRIM26Q12899 539 aaPredicted RBP10.96□□□□□ -0.65
PSD3-220ENST00000615573 RSF1Q96T23 1441 aaPredicted RBP10.94□□□□□ -0.66
PSD3-220ENST00000615573 RANGAP1P46060 587 aaPredicted RBP10.92□□□□□ -0.66
PSD3-220ENST00000615573 CCER1Q8TC90 406 aaPredicted RBP10.9□□□□□ -0.67
PSD3-220ENST00000615573 ACIN1Q9UKV3 1341 aaKnown RBP10.87□□□□□ -0.67
PSD3-220ENST00000615573 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.86□□□□□ -0.67
PSD3-220ENST00000615573 HNRNPUL2Q1KMD3 747 aaKnown RBP10.86□□□□□ -0.67
PSD3-220ENST00000615573 PCGF6Q9BYE7 350 aa10.85□□□□□ -0.67
PSD3-220ENST00000615573 CSRNP3Q8WYN3 585 aa10.85□□□□□ -0.67
PSD3-220ENST00000615573 TOP2AP11388 1531 aaKnown RBP10.84□□□□□ -0.67
PSD3-220ENST00000615573 CDK11AQ9UQ88 783 aaPredicted RBP10.82□□□□□ -0.68
PSD3-220ENST00000615573 SMARCA4P51532 1647 aa10.76□□□□□ -0.69
PSD3-220ENST00000615573 WRNQ14191 1432 aaPredicted RBP eCLIP10.75□□□□□ -0.69
PSD3-220ENST00000615573 CENPBP07199 599 aaPredicted RBP10.75□□□□□ -0.69
PSD3-220ENST00000615573 MYT1LQ9UL68 1186 aa10.75□□□□□ -0.69
PSD3-220ENST00000615573 PDS5BQ9NTI5 1447 aa10.74□□□□□ -0.69
PSD3-220ENST00000615573 TTBK1Q5TCY1 1321 aaPredicted RBP10.74□□□□□ -0.69
PSD3-220ENST00000615573 GOLGA3Q08378 1498 aa10.74□□□□□ -0.69
PSD3-220ENST00000615573 KIF27Q86VH2 1401 aa10.74□□□□□ -0.69
PSD3-220ENST00000615573 ABCC8Q09428 1581 aa10.72□□□□□ -0.69
PSD3-220ENST00000615573 ERCC6Q03468 1493 aa10.71□□□□□ -0.69
PSD3-220ENST00000615573 CEP164Q9UPV0 1460 aa10.7□□□□□ -0.7
PSD3-220ENST00000615573 MROH2BQ7Z745 1585 aa10.66□□□□□ -0.7
PSD3-220ENST00000615573 CECR2Q9BXF3 1484 aa10.64□□□□□ -0.71
PSD3-220ENST00000615573 FBLN2P98095 1184 aa10.64□□□□□ -0.71
PSD3-220ENST00000615573 NPM1P06748 294 aaKnown RBP eCLIP10.63□□□□□ -0.71
PSD3-220ENST00000615573 ATAD2BQ9ULI0 1458 aa10.63□□□□□ -0.71
PSD3-220ENST00000615573 LOC105371045A0A1W2PR82 267 aa10.62□□□□□ -0.71
PSD3-220ENST00000615573 CCDC88BA6NC98 1476 aa10.61□□□□□ -0.71
PSD3-220ENST00000615573 FAM50AQ14320 339 aaKnown RBP10.6□□□□□ -0.71
PSD3-220ENST00000615573 CHMP7Q8WUX9 453 aaPredicted RBP10.59□□□□□ -0.71
PSD3-220ENST00000615573 TNIKQ9UKE5 1360 aa10.58□□□□□ -0.72
PSD3-220ENST00000615573 HMGXB3Q12766 1538 aa10.56□□□□□ -0.72
PSD3-220ENST00000615573 NCAPD3P42695 1498 aa10.56□□□□□ -0.72
PSD3-220ENST00000615573 CADPSQ9ULU8 1353 aa10.56□□□□□ -0.72
PSD3-220ENST00000615573 CLIP1P30622 1438 aa10.55□□□□□ -0.72
PSD3-220ENST00000615573 WIZO95785 1651 aa10.55□□□□□ -0.72
PSD3-220ENST00000615573 FHAD1B1AJZ9 1412 aa10.55□□□□□ -0.72
PSD3-220ENST00000615573 NEFLP07196 543 aa10.53□□□□□ -0.72
PSD3-220ENST00000615573 ITGAEP38570 1179 aa10.52□□□□□ -0.73
PSD3-220ENST00000615573 TRIM52Q96A61 297 aa10.52□□□□□ -0.73
PSD3-220ENST00000615573 EIF4G1Q04637 1599 aaKnown RBP10.51□□□□□ -0.73
PSD3-220ENST00000615573 HRCP23327 699 aa10.5□□□□□ -0.73
PSD3-220ENST00000615573 CARMIL2Q6F5E8 1435 aa10.47□□□□□ -0.73
PSD3-220ENST00000615573 CUX2O14529 1486 aa10.47□□□□□ -0.73
PSD3-220ENST00000615573 MTUS2Q5JR59 1369 aa10.46□□□□□ -0.73
PSD3-220ENST00000615573 CEP162Q5TB80 1403 aa10.45□□□□□ -0.74
PSD3-220ENST00000615573 CARMIL1Q5VZK9 1371 aa10.44□□□□□ -0.74
PSD3-220ENST00000615573 SOGA1O94964 1423 aa10.44□□□□□ -0.74
PSD3-220ENST00000615573 ESF1Q9H501 851 aaKnown RBP10.42□□□□□ -0.74
PSD3-220ENST00000615573 FANCD2Q9BXW9 1451 aa10.42□□□□□ -0.74
PSD3-220ENST00000615573 PPARGC1BQ86YN6 1023 aaKnown RBP10.42□□□□□ -0.74
PSD3-220ENST00000615573 PLEKHD1A6NEE1 506 aa10.4□□□□□ -0.74
PSD3-220ENST00000615573 FMN1Q68DA7 1419 aa10.39□□□□□ -0.75
PSD3-220ENST00000615573 RAPGEF2Q9Y4G8 1499 aa10.39□□□□□ -0.75
PSD3-220ENST00000615573 P3H3Q8IVL6 736 aa10.38□□□□□ -0.75
PSD3-220ENST00000615573 TSPY4P0CV99 314 aa10.38□□□□□ -0.75
PSD3-220ENST00000615573 TSPY10P0CW01 314 aa10.38□□□□□ -0.75
PSD3-220ENST00000615573 PEG3Q9GZU2 1588 aa10.36□□□□□ -0.75
PSD3-220ENST00000615573 CC2D2AQ9P2K1 1620 aa10.33□□□□□ -0.76
PSD3-220ENST00000615573 ZNF777Q9ULD5 760 aaPredicted RBP10.33□□□□□ -0.76
PSD3-220ENST00000615573 LAMC3Q9Y6N6 1575 aa10.32□□□□□ -0.76
PSD3-220ENST00000615573 MRC2Q9UBG0 1479 aa10.32□□□□□ -0.76
PSD3-220ENST00000615573 CFTRP13569 1480 aa10.31□□□□□ -0.76
PSD3-220ENST00000615573 TONSLQ96HA7 1378 aa10.3□□□□□ -0.76
PSD3-220ENST00000615573 BICRAQ9NZM4 1560 aa10.29□□□□□ -0.76
PSD3-220ENST00000615573 VPS8Q8N3P4 1428 aa10.29□□□□□ -0.76
PSD3-220ENST00000615573 CLSPNQ9HAW4 1339 aa10.29□□□□□ -0.76
PSD3-220ENST00000615573 IFT140Q96RY7 1462 aa10.29□□□□□ -0.76
PSD3-220ENST00000615573 CCNB3Q8WWL7 1395 aa10.28□□□□□ -0.76
PSD3-220ENST00000615573 ANP32CO43423 234 aa10.27□□□□□ -0.77
PSD3-220ENST00000615573 ERICH6Q7L0X2 663 aa10.27□□□□□ -0.77
PSD3-220ENST00000615573 ERICH3Q5RHP9 1530 aa10.27□□□□□ -0.77
PSD3-220ENST00000615573 ARHGAP35Q9NRY4 1499 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms