RNA–Protein interactions for RNA: ENST00000370504.3

SPANXN4-201, Transcript of SPANX family member N4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPANXN4, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPANXN4-201ENST00000370504 AEBP2Q6ZN18 517 aaPredicted RBP21.35■■□□□ 1.01
SPANXN4-201ENST00000370504 CHIC1Q5VXU3 224 aa20.73■□□□□ 0.91
SPANXN4-201ENST00000370504 PHF23Q9BUL5 403 aaPredicted RBP18.24■□□□□ 0.51
SPANXN4-201ENST00000370504 SENP3Q9H4L4 574 aaPredicted RBP18.1■□□□□ 0.49
SPANXN4-201ENST00000370504 FOXD1Q16676 465 aa16.85■□□□□ 0.29
SPANXN4-201ENST00000370504 PLPPR3Q6T4P5 718 aa16.79■□□□□ 0.28
SPANXN4-201ENST00000370504 ADRA2BP18089 450 aa16.15■□□□□ 0.18
SPANXN4-201ENST00000370504 PPP6R1Q9UPN7 881 aa16.15■□□□□ 0.18
SPANXN4-201ENST00000370504 POTEDQ86YR6 584 aa16.02■□□□□ 0.16
SPANXN4-201ENST00000370504 PIAS4Q8N2W9 510 aaPredicted RBP15.87■□□□□ 0.13
SPANXN4-201ENST00000370504 MSH5O43196 834 aa15.54■□□□□ 0.08
SPANXN4-201ENST00000370504 PPP4R3CPQ6ZMV5 832 aa14.81□□□□□ -0.04
SPANXN4-201ENST00000370504 SCAF1Q9H7N4 1312 aaKnown RBP14.73□□□□□ -0.05
SPANXN4-201ENST00000370504 MAPK8IP2Q13387 824 aaPredicted RBP14.7□□□□□ -0.06
SPANXN4-201ENST00000370504 DMRT2Q9Y5R5 561 aa14.43□□□□□ -0.1
SPANXN4-201ENST00000370504 CNKSR2Q8WXI2 1034 aa14.39□□□□□ -0.11
SPANXN4-201ENST00000370504 NCBP3Q53F19 620 aaKnown RBP14.38□□□□□ -0.11
SPANXN4-201ENST00000370504 KCNA4P22459 653 aa14.35□□□□□ -0.11
SPANXN4-201ENST00000370504 NPM3O75607 178 aaKnown RBP14.17□□□□□ -0.14
SPANXN4-201ENST00000370504 RNF216Q9NWF9 866 aaPredicted RBP14.13□□□□□ -0.15
SPANXN4-201ENST00000370504 HOXD11P31277 338 aaPredicted RBP14.08□□□□□ -0.16
SPANXN4-201ENST00000370504 DCAF8L1A6NGE4 600 aa13.92□□□□□ -0.18
SPANXN4-201ENST00000370504 DNAJC5BQ9UF47 199 aa13.66□□□□□ -0.22
SPANXN4-201ENST00000370504 SLC4A1APQ9BWU0 796 aaKnown RBP13.65□□□□□ -0.22
SPANXN4-201ENST00000370504 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.49□□□□□ -0.25
SPANXN4-201ENST00000370504 SLC4A2P04920 1241 aa13.41□□□□□ -0.26
SPANXN4-201ENST00000370504 CACNB1Q02641 598 aaPredicted RBP13.34□□□□□ -0.27
SPANXN4-201ENST00000370504 EHMT2Q96KQ7 1210 aa13.32□□□□□ -0.28
SPANXN4-201ENST00000370504 RNF39Q9H2S5 420 aa13.31□□□□□ -0.28
SPANXN4-201ENST00000370504 U3KPZ7 1027 aaPredicted RBP13.22□□□□□ -0.29
SPANXN4-201ENST00000370504 FOXD4L1Q9NU39 408 aa13.21□□□□□ -0.29
SPANXN4-201ENST00000370504 ZBTB22O15209 634 aa13.18□□□□□ -0.3
SPANXN4-201ENST00000370504 C1QBPQ07021 282 aaKnown RBP13.15□□□□□ -0.3
SPANXN4-201ENST00000370504 MYCNP04198 464 aaPredicted RBP13.07□□□□□ -0.32
SPANXN4-201ENST00000370504 CSRNP3Q8WYN3 585 aa13.04□□□□□ -0.32
SPANXN4-201ENST00000370504 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13□□□□□ -0.33
SPANXN4-201ENST00000370504 HNRNPUL2Q1KMD3 747 aaKnown RBP13□□□□□ -0.33
SPANXN4-201ENST00000370504 SAMD1Q6SPF0 538 aaPredicted RBP12.95□□□□□ -0.34
SPANXN4-201ENST00000370504 SPINK5Q9NQ38 1064 aaPredicted RBP12.92□□□□□ -0.34
SPANXN4-201ENST00000370504 CAPN15O75808 1086 aa12.89□□□□□ -0.35
SPANXN4-201ENST00000370504 APLP2Q06481 763 aa12.88□□□□□ -0.35
SPANXN4-201ENST00000370504 TRHP20396 242 aaPredicted RBP12.82□□□□□ -0.36
SPANXN4-201ENST00000370504 ATF5Q9Y2D1 282 aaPredicted RBP12.78□□□□□ -0.36
SPANXN4-201ENST00000370504 ZNF219Q9P2Y4 722 aaPredicted RBP12.73□□□□□ -0.37
SPANXN4-201ENST00000370504 ATXN8OSP0DMR3 200 aa12.72□□□□□ -0.37
SPANXN4-201ENST00000370504 ABCB7O75027 752 aa12.65□□□□□ -0.38
SPANXN4-201ENST00000370504 DSG3P32926 999 aa12.65□□□□□ -0.38
SPANXN4-201ENST00000370504 POLA2Q14181 598 aa12.57□□□□□ -0.4
SPANXN4-201ENST00000370504 POTEHQ6S545 545 aa12.38□□□□□ -0.43
SPANXN4-201ENST00000370504 ZBTB12Q9Y330 459 aaPredicted RBP12.27□□□□□ -0.45
SPANXN4-201ENST00000370504 FBLN2P98095 1184 aa12.24□□□□□ -0.45
SPANXN4-201ENST00000370504 MKRN4PQ13434 485 aaPredicted RBP12.2□□□□□ -0.46
SPANXN4-201ENST00000370504 OSCARQ8IYS5 282 aa12.12□□□□□ -0.47
SPANXN4-201ENST00000370504 RBM42Q9BTD8 480 aaKnown RBP12.03□□□□□ -0.48
SPANXN4-201ENST00000370504 SPDYE2BA6NHP3 402 aa11.95□□□□□ -0.5
SPANXN4-201ENST00000370504 SPDYE6P0CI01 402 aa11.95□□□□□ -0.5
SPANXN4-201ENST00000370504 SPDYE2Q495Y8 402 aa11.95□□□□□ -0.5
SPANXN4-201ENST00000370504 ZNF692Q9BU19 519 aaPredicted RBP11.95□□□□□ -0.5
SPANXN4-201ENST00000370504 SPDYE4A6NLX3 237 aa11.89□□□□□ -0.51
SPANXN4-201ENST00000370504 AKT1S1Q96B36 256 aa11.88□□□□□ -0.51
SPANXN4-201ENST00000370504 SSUH2Q9Y2M2 353 aa11.83□□□□□ -0.52
SPANXN4-201ENST00000370504 FKBP8Q14318 412 aa11.82□□□□□ -0.52
SPANXN4-201ENST00000370504 REM2Q8IYK8 340 aaPredicted RBP11.79□□□□□ -0.52
SPANXN4-201ENST00000370504 PABPN1Q86U42 306 aaKnown RBP eCLIP11.78□□□□□ -0.52
SPANXN4-201ENST00000370504 CLEC11AQ9Y240 323 aa11.67□□□□□ -0.54
SPANXN4-201ENST00000370504 PITPNM1O00562 1244 aa11.65□□□□□ -0.54
SPANXN4-201ENST00000370504 SPDYE1Q8NFV5 336 aaPredicted RBP11.65□□□□□ -0.54
SPANXN4-201ENST00000370504 CHRDL2Q6WN34 429 aa11.6□□□□□ -0.55
SPANXN4-201ENST00000370504 PROM2Q8N271 834 aa11.6□□□□□ -0.55
SPANXN4-201ENST00000370504 STAG3Q9UJ98 1225 aa11.53□□□□□ -0.56
SPANXN4-201ENST00000370504 PRR29P0C7W0 189 aa11.52□□□□□ -0.57
SPANXN4-201ENST00000370504 AMER1Q5JTC6 1135 aaPredicted RBP11.44□□□□□ -0.58
SPANXN4-201ENST00000370504 PIP4P2Q8N4L2 257 aa11.44□□□□□ -0.58
SPANXN4-201ENST00000370504 FXR2P51116 673 aaKnown RBP eCLIP11.43□□□□□ -0.58
SPANXN4-201ENST00000370504 FBXO3Q9UK99 471 aa11.39□□□□□ -0.59
SPANXN4-201ENST00000370504 CHADLQ6NUI6 762 aa11.38□□□□□ -0.59
SPANXN4-201ENST00000370504 PRKAR2AP13861 404 aaKnown RBP11.37□□□□□ -0.59
SPANXN4-201ENST00000370504 RTN4Q9NQC3 1192 aaKnown RBP11.36□□□□□ -0.59
SPANXN4-201ENST00000370504 MIER1Q8N108 512 aa11.33□□□□□ -0.6
SPANXN4-201ENST00000370504 CREBZFQ9NS37 354 aa11.32□□□□□ -0.6
SPANXN4-201ENST00000370504 PLCD3Q8N3E9 789 aa11.28□□□□□ -0.6
SPANXN4-201ENST00000370504 PLEKHG5O94827 1062 aa11.24□□□□□ -0.61
SPANXN4-201ENST00000370504 VASPP50552 380 aaPredicted RBP11.24□□□□□ -0.61
SPANXN4-201ENST00000370504 FARP1Q9Y4F1 1045 aaPredicted RBP11.23□□□□□ -0.61
SPANXN4-201ENST00000370504 SP7Q8TDD2 431 aaPredicted RBP11.22□□□□□ -0.61
SPANXN4-201ENST00000370504 MNX1P50219 401 aaPredicted RBP11.16□□□□□ -0.62
SPANXN4-201ENST00000370504 HAX1O00165 279 aa11.15□□□□□ -0.62
SPANXN4-201ENST00000370504 KLHL34Q8N239 644 aa11.14□□□□□ -0.63
SPANXN4-201ENST00000370504 NPM1P06748 294 aaKnown RBP eCLIP11.13□□□□□ -0.63
SPANXN4-201ENST00000370504 ZBTB47Q9UFB7 747 aaPredicted RBP11.11□□□□□ -0.63
SPANXN4-201ENST00000370504 IFNLR1Q8IU57 520 aaPredicted RBP11.1□□□□□ -0.63
SPANXN4-201ENST00000370504 C19orf67A6NJJ6 358 aa11.05□□□□□ -0.64
SPANXN4-201ENST00000370504 CD44P16070 742 aaKnown RBP11.03□□□□□ -0.64
SPANXN4-201ENST00000370504 EVX2Q03828 476 aa11.03□□□□□ -0.64
SPANXN4-201ENST00000370504 NUBP1P53384 320 aa10.99□□□□□ -0.65
SPANXN4-201ENST00000370504 TSPYL2Q9H2G4 693 aaPredicted RBP10.99□□□□□ -0.65
SPANXN4-201ENST00000370504 RASEFQ8IZ41 740 aa10.98□□□□□ -0.65
SPANXN4-201ENST00000370504 SPOCK2Q92563 424 aa10.98□□□□□ -0.65
SPANXN4-201ENST00000370504 ZRANB1Q9UGI0 708 aa10.98□□□□□ -0.65
SPANXN4-201ENST00000370504 PAK3O75914 559 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms