RNA–Protein interactions for RNA: ENST00000459546.1

RNU7-140P-201, Transcript of RNA, U7 small nuclear 140 pseudogene, humanhuman

BASIC

Gene RNU7-140P, Length 60 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU7-140P-201ENST00000459546 AEBP2Q6ZN18 517 aaPredicted RBP20.02■□□□□ 0.8
RNU7-140P-201ENST00000459546 CHIC1Q5VXU3 224 aa20■□□□□ 0.79
RNU7-140P-201ENST00000459546 PHF23Q9BUL5 403 aaPredicted RBP17.58■□□□□ 0.4
RNU7-140P-201ENST00000459546 SENP3Q9H4L4 574 aaPredicted RBP17.05■□□□□ 0.32
RNU7-140P-201ENST00000459546 PLPPR3Q6T4P5 718 aa16.48■□□□□ 0.23
RNU7-140P-201ENST00000459546 FOXD1Q16676 465 aa15.7■□□□□ 0.1
RNU7-140P-201ENST00000459546 ADRA2BP18089 450 aa15.43■□□□□ 0.06
RNU7-140P-201ENST00000459546 PPP6R1Q9UPN7 881 aa15.38■□□□□ 0.05
RNU7-140P-201ENST00000459546 PIAS4Q8N2W9 510 aaPredicted RBP14.97□□□□□ -0.01
RNU7-140P-201ENST00000459546 KCNA4P22459 653 aa14.61□□□□□ -0.07
RNU7-140P-201ENST00000459546 PPP4R3CPQ6ZMV5 832 aa14.54□□□□□ -0.08
RNU7-140P-201ENST00000459546 MSH5O43196 834 aa14.41□□□□□ -0.1
RNU7-140P-201ENST00000459546 NCBP3Q53F19 620 aaKnown RBP14.36□□□□□ -0.11
RNU7-140P-201ENST00000459546 SCAF1Q9H7N4 1312 aaKnown RBP14.24□□□□□ -0.13
RNU7-140P-201ENST00000459546 EHMT2Q96KQ7 1210 aa14.1□□□□□ -0.15
RNU7-140P-201ENST00000459546 CNKSR2Q8WXI2 1034 aa14.07□□□□□ -0.16
RNU7-140P-201ENST00000459546 NPM3O75607 178 aaKnown RBP14.05□□□□□ -0.16
RNU7-140P-201ENST00000459546 SLC4A1APQ9BWU0 796 aaKnown RBP14.05□□□□□ -0.16
RNU7-140P-201ENST00000459546 MAPK8IP2Q13387 824 aaPredicted RBP13.86□□□□□ -0.19
RNU7-140P-201ENST00000459546 CSRNP3Q8WYN3 585 aa13.69□□□□□ -0.22
RNU7-140P-201ENST00000459546 RNF216Q9NWF9 866 aaPredicted RBP13.69□□□□□ -0.22
RNU7-140P-201ENST00000459546 DMRT2Q9Y5R5 561 aa13.63□□□□□ -0.23
RNU7-140P-201ENST00000459546 DNAJC5BQ9UF47 199 aa13.55□□□□□ -0.24
RNU7-140P-201ENST00000459546 HOXD11P31277 338 aaPredicted RBP13.49□□□□□ -0.25
RNU7-140P-201ENST00000459546 ZBTB22O15209 634 aa13.4□□□□□ -0.26
RNU7-140P-201ENST00000459546 FOXD4L1Q9NU39 408 aa13.39□□□□□ -0.27
RNU7-140P-201ENST00000459546 DCAF8L1A6NGE4 600 aa13.12□□□□□ -0.31
RNU7-140P-201ENST00000459546 SLC4A2P04920 1241 aa13.12□□□□□ -0.31
RNU7-140P-201ENST00000459546 MYCNP04198 464 aaPredicted RBP13.02□□□□□ -0.33
RNU7-140P-201ENST00000459546 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.94□□□□□ -0.34
RNU7-140P-201ENST00000459546 ATXN8OSP0DMR3 200 aa12.9□□□□□ -0.34
RNU7-140P-201ENST00000459546 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.79□□□□□ -0.36
RNU7-140P-201ENST00000459546 HNRNPUL2Q1KMD3 747 aaKnown RBP12.79□□□□□ -0.36
RNU7-140P-201ENST00000459546 SAMD1Q6SPF0 538 aaPredicted RBP12.73□□□□□ -0.37
RNU7-140P-201ENST00000459546 U3KPZ7 1027 aaPredicted RBP12.69□□□□□ -0.38
RNU7-140P-201ENST00000459546 APLP2Q06481 763 aa12.59□□□□□ -0.39
RNU7-140P-201ENST00000459546 ATF5Q9Y2D1 282 aaPredicted RBP12.54□□□□□ -0.4
RNU7-140P-201ENST00000459546 FKBP8Q14318 412 aa12.42□□□□□ -0.42
RNU7-140P-201ENST00000459546 ZNF219Q9P2Y4 722 aaPredicted RBP12.39□□□□□ -0.43
RNU7-140P-201ENST00000459546 POTEDQ86YR6 584 aa12.36□□□□□ -0.43
RNU7-140P-201ENST00000459546 RNF39Q9H2S5 420 aa12.32□□□□□ -0.44
RNU7-140P-201ENST00000459546 TRHP20396 242 aaPredicted RBP12.26□□□□□ -0.45
RNU7-140P-201ENST00000459546 C1QBPQ07021 282 aaKnown RBP12.25□□□□□ -0.45
RNU7-140P-201ENST00000459546 CAPN15O75808 1086 aa12.24□□□□□ -0.45
RNU7-140P-201ENST00000459546 SPINK5Q9NQ38 1064 aaPredicted RBP12.22□□□□□ -0.45
RNU7-140P-201ENST00000459546 FBLN2P98095 1184 aa12.14□□□□□ -0.47
RNU7-140P-201ENST00000459546 POLA2Q14181 598 aa12.13□□□□□ -0.47
RNU7-140P-201ENST00000459546 SPDYE4A6NLX3 237 aa12.04□□□□□ -0.48
RNU7-140P-201ENST00000459546 AMER1Q5JTC6 1135 aaPredicted RBP12.04□□□□□ -0.48
RNU7-140P-201ENST00000459546 MKRN4PQ13434 485 aaPredicted RBP12.03□□□□□ -0.48
RNU7-140P-201ENST00000459546 ZBTB12Q9Y330 459 aaPredicted RBP12.03□□□□□ -0.48
RNU7-140P-201ENST00000459546 ABCB7O75027 752 aa11.99□□□□□ -0.49
RNU7-140P-201ENST00000459546 RTN4Q9NQC3 1192 aaKnown RBP11.95□□□□□ -0.5
RNU7-140P-201ENST00000459546 FBXO3Q9UK99 471 aa11.94□□□□□ -0.5
RNU7-140P-201ENST00000459546 DSG3P32926 999 aa11.86□□□□□ -0.51
RNU7-140P-201ENST00000459546 PROM2Q8N271 834 aa11.8□□□□□ -0.52
RNU7-140P-201ENST00000459546 CACNB1Q02641 598 aaPredicted RBP11.79□□□□□ -0.52
RNU7-140P-201ENST00000459546 ZNF692Q9BU19 519 aaPredicted RBP11.72□□□□□ -0.53
RNU7-140P-201ENST00000459546 VASPP50552 380 aaPredicted RBP11.69□□□□□ -0.54
RNU7-140P-201ENST00000459546 SPDYE2BA6NHP3 402 aa11.68□□□□□ -0.54
RNU7-140P-201ENST00000459546 SPDYE6P0CI01 402 aa11.68□□□□□ -0.54
RNU7-140P-201ENST00000459546 SPDYE2Q495Y8 402 aa11.68□□□□□ -0.54
RNU7-140P-201ENST00000459546 OSCARQ8IYS5 282 aa11.68□□□□□ -0.54
RNU7-140P-201ENST00000459546 SSUH2Q9Y2M2 353 aa11.58□□□□□ -0.56
RNU7-140P-201ENST00000459546 PABPN1Q86U42 306 aaKnown RBP eCLIP11.55□□□□□ -0.56
RNU7-140P-201ENST00000459546 STAG3Q9UJ98 1225 aa11.55□□□□□ -0.56
RNU7-140P-201ENST00000459546 IFNLR1Q8IU57 520 aaPredicted RBP11.52□□□□□ -0.57
RNU7-140P-201ENST00000459546 SLC24A1O60721 1099 aa11.49□□□□□ -0.57
RNU7-140P-201ENST00000459546 KLHL34Q8N239 644 aa11.48□□□□□ -0.57
RNU7-140P-201ENST00000459546 PLCD3Q8N3E9 789 aa11.46□□□□□ -0.57
RNU7-140P-201ENST00000459546 MIER1Q8N108 512 aa11.41□□□□□ -0.58
RNU7-140P-201ENST00000459546 PLEKHG5O94827 1062 aa11.4□□□□□ -0.58
RNU7-140P-201ENST00000459546 SPOCK2Q92563 424 aa11.39□□□□□ -0.59
RNU7-140P-201ENST00000459546 RBM42Q9BTD8 480 aaKnown RBP11.39□□□□□ -0.59
RNU7-140P-201ENST00000459546 ZBTB47Q9UFB7 747 aaPredicted RBP11.33□□□□□ -0.6
RNU7-140P-201ENST00000459546 DCAF8L2P0C7V8 631 aa11.32□□□□□ -0.6
RNU7-140P-201ENST00000459546 AKT1S1Q96B36 256 aa11.29□□□□□ -0.6
RNU7-140P-201ENST00000459546 PKD2Q13563 968 aa11.28□□□□□ -0.6
RNU7-140P-201ENST00000459546 SPDYE1Q8NFV5 336 aaPredicted RBP11.27□□□□□ -0.61
RNU7-140P-201ENST00000459546 ECM2O94769 699 aaPredicted RBP11.22□□□□□ -0.61
RNU7-140P-201ENST00000459546 CLEC11AQ9Y240 323 aa11.21□□□□□ -0.61
RNU7-140P-201ENST00000459546 CIZ1Q9ULV3 898 aaPredicted RBP11.17□□□□□ -0.62
RNU7-140P-201ENST00000459546 PRR29P0C7W0 189 aa11.16□□□□□ -0.62
RNU7-140P-201ENST00000459546 REM2Q8IYK8 340 aaPredicted RBP11.16□□□□□ -0.62
RNU7-140P-201ENST00000459546 PLCB2Q00722 1185 aa11.1□□□□□ -0.63
RNU7-140P-201ENST00000459546 TRIM41Q8WV44 630 aa11.08□□□□□ -0.64
RNU7-140P-201ENST00000459546 GSE1Q14687 1217 aa11.07□□□□□ -0.64
RNU7-140P-201ENST00000459546 RGL2O15211 777 aa11.04□□□□□ -0.64
RNU7-140P-201ENST00000459546 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.03□□□□□ -0.64
RNU7-140P-201ENST00000459546 CREBZFQ9NS37 354 aa11.02□□□□□ -0.65
RNU7-140P-201ENST00000459546 PITPNM1O00562 1244 aa11.01□□□□□ -0.65
RNU7-140P-201ENST00000459546 DCAF8Q5TAQ9 597 aa11.01□□□□□ -0.65
RNU7-140P-201ENST00000459546 BBXQ8WY36 941 aaPredicted RBP11□□□□□ -0.65
RNU7-140P-201ENST00000459546 NUBP1P53384 320 aa10.99□□□□□ -0.65
RNU7-140P-201ENST00000459546 FAM212AQ96EL1 285 aa10.99□□□□□ -0.65
RNU7-140P-201ENST00000459546 HAP1P54257 671 aaPredicted RBP10.98□□□□□ -0.65
RNU7-140P-201ENST00000459546 NPM1P06748 294 aaKnown RBP eCLIP10.96□□□□□ -0.65
RNU7-140P-201ENST00000459546 TAOK2Q9UL54 1235 aa10.93□□□□□ -0.66
RNU7-140P-201ENST00000459546 CHGAP10645 457 aaKnown RBP10.92□□□□□ -0.66
RNU7-140P-201ENST00000459546 MNX1P50219 401 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms