Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 TIFAB-201ENST00000537858 5923 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 FCHO2-202ENST00000430046 4981 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 ARL1-201ENST00000261636 3241 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 IPO4-201ENST00000354464 3646 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 SMPD4-205ENST00000431183 3614 ntTSL 2 BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 MAST2-203ENST00000372009 4047 ntTSL 5 BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 COL10A1-202ENST00000327673 3498 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 ZNF599-202ENST00000587354 3476 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 IFNLR1-201ENST00000327535 4549 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 ARHGAP12-202ENST00000344936 4128 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 ZNF695-201ENST00000339986 3340 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 UPK1B-201ENST00000264234 2118 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 ADAM24P-201ENST00000398655 2101 ntBASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 PRKAR1A-201ENST00000358598 3576 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 ESR2-208ENST00000554572 3588 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 AC008132.1-203ENST00000412938 5920 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 IFNAR2-201ENST00000342101 2606 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 TPD52-213ENST00000520527 2638 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 SERPINA5-205ENST00000554276 2210 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 SERPINA5-208ENST00000554866 2211 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 JADE1-213ENST00000610919 5644 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 DEPDC1-201ENST00000370966 4586 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 MAP2K6-206ENST00000590474 2870 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 PRAMEF8-201ENST00000357367 1844 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 TTLL5-202ENST00000298832 4683 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 WDR75-201ENST00000314761 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 STAG3L5P-PVRIG2P-PILRB-201ENST00000310771 3634 ntTSL 2 BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 PRRG1-209ENST00000543642 4509 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 LDHA-218ENST00000540430 2305 ntTSL 2 BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 MFAP3L-201ENST00000361618 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 TCF12-204ENST00000438423 4786 ntAPPRIS P4 TSL 5 BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 AL772363.1-201ENST00000371390 3222 ntTSL 2 BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 THUMPD1-201ENST00000381337 4122 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 NEK6-215ENST00000546191 2580 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 SND1-201ENST00000354725 3476 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 EML1-202ENST00000327921 3715 ntTSL 2 BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 STK31-202ENST00000355870 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 RPS11-201ENST00000270625 614 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 PRDX2-201ENST00000301522 987 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 AC245297.1-201ENST00000313342 933 ntBASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 GSTM4-202ENST00000336075 657 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 Y_RNA.94-201ENST00000363068 106 ntBASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 RNU6-1167P-201ENST00000363227 94 ntBASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 TMEM254-202ENST00000372274 481 ntTSL 2 BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 RNU1-74P-201ENST00000384108 171 ntBASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 AL353747.1-201ENST00000404577 267 ntBASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 TMEM139-202ENST00000409102 1226 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 Y_RNA.601-201ENST00000410500 113 ntBASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 RNU6-1245P-201ENST00000411130 106 ntBASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 RN7SKP101-201ENST00000411376 320 ntBASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 AL359510.1-201ENST00000413855 208 ntBASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 AC019118.2-202ENST00000419347 416 ntTSL 3 BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 KRTAP8-3P-201ENST00000423658 188 ntBASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 OR2AH1P-201ENST00000425717 928 ntBASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 AL139008.1-201ENST00000437894 228 ntBASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 TRBV22OR9-2-201ENST00000441373 136 ntBASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 AL353615.1-201ENST00000450850 390 ntTSL 3 BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 AC245102.1-201ENST00000454989 520 ntBASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 RNA5SP57-201ENST00000459463 123 ntBASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 TRBV5-2-201ENST00000489095 273 ntBASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 AL645924.1-201ENST00000502641 220 ntTSL 5 BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 LINC02221-201ENST00000508097 499 ntTSL 3 BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 RNU6-162P-201ENST00000516228 103 ntBASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 RNU6-344P-201ENST00000516635 111 ntBASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 RNU6-1006P-201ENST00000516998 103 ntBASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 AC090820.1-201ENST00000519722 591 ntBASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 AC100797.1-201ENST00000520760 316 ntTSL 2 BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 AC009021.1-201ENST00000566098 375 ntTSL 5 BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 AC018846.1-201ENST00000568231 183 ntBASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 PROCA1-209ENST00000581289 766 ntTSL 3 BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 AC005702.1-201ENST00000593015 692 ntTSL 2 BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 RPS11-202ENST00000594493 575 ntTSL 3 BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 RPS11-205ENST00000599561 430 ntTSL 5 BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 AL355812.1-201ENST00000603215 216 ntBASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 AC145423.2-201ENST00000610631 239 ntBASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 AC130343.2-201ENST00000615078 426 ntBASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 MIR548AY-201ENST00000617669 107 ntBASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 5S_rRNA.13-201ENST00000622298 123 ntBASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 PTPN7-219ENST00000629151 437 ntTSL 5 BASIC5.51□□□□□ -1.53
KRTAP3-3Q9BYR6 PFKM-232ENST00000629846 381 ntTSL 4 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 153.4 ms