RNA–Protein interactions for RNA: ENST00000516228.1

RNU6-162P-201, Transcript of RNA, U6 small nuclear 162, pseudogene, humanhuman

BASIC

Gene RNU6-162P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-162P-201ENST00000516228 AEBP2Q6ZN18 517 aaPredicted RBP12.15□□□□□ -0.46
RNU6-162P-201ENST00000516228 CHIC1Q5VXU3 224 aa11.56□□□□□ -0.56
RNU6-162P-201ENST00000516228 SENP3Q9H4L4 574 aaPredicted RBP10.67□□□□□ -0.7
RNU6-162P-201ENST00000516228 PHF23Q9BUL5 403 aaPredicted RBP10.34□□□□□ -0.75
RNU6-162P-201ENST00000516228 POTEDQ86YR6 584 aa10.22□□□□□ -0.77
RNU6-162P-201ENST00000516228 FOXD1Q16676 465 aa9.86□□□□□ -0.83
RNU6-162P-201ENST00000516228 MSH5O43196 834 aa9.63□□□□□ -0.87
RNU6-162P-201ENST00000516228 PIAS4Q8N2W9 510 aaPredicted RBP9.12□□□□□ -0.95
RNU6-162P-201ENST00000516228 PPP6R1Q9UPN7 881 aa8.7□□□□□ -1.02
RNU6-162P-201ENST00000516228 PLPPR3Q6T4P5 718 aa8.69□□□□□ -1.02
RNU6-162P-201ENST00000516228 ADRA2BP18089 450 aa8.67□□□□□ -1.02
RNU6-162P-201ENST00000516228 CACNB1Q02641 598 aaPredicted RBP8.53□□□□□ -1.04
RNU6-162P-201ENST00000516228 DMRT2Q9Y5R5 561 aa8.32□□□□□ -1.08
RNU6-162P-201ENST00000516228 SCAF1Q9H7N4 1312 aaKnown RBP8.18□□□□□ -1.1
RNU6-162P-201ENST00000516228 MAPK8IP2Q13387 824 aaPredicted RBP8.09□□□□□ -1.11
RNU6-162P-201ENST00000516228 RNF39Q9H2S5 420 aa8.08□□□□□ -1.12
RNU6-162P-201ENST00000516228 C1QBPQ07021 282 aaKnown RBP8.01□□□□□ -1.13
RNU6-162P-201ENST00000516228 DCAF8L1A6NGE4 600 aa7.94□□□□□ -1.14
RNU6-162P-201ENST00000516228 POTEHQ6S545 545 aa7.94□□□□□ -1.14
RNU6-162P-201ENST00000516228 DNAJC5BQ9UF47 199 aa7.8□□□□□ -1.16
RNU6-162P-201ENST00000516228 HOXD11P31277 338 aaPredicted RBP7.79□□□□□ -1.16
RNU6-162P-201ENST00000516228 RNF216Q9NWF9 866 aaPredicted RBP7.61□□□□□ -1.19
RNU6-162P-201ENST00000516228 CNKSR2Q8WXI2 1034 aa7.53□□□□□ -1.2
RNU6-162P-201ENST00000516228 PPP4R3CPQ6ZMV5 832 aa7.45□□□□□ -1.22
RNU6-162P-201ENST00000516228 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.42□□□□□ -1.22
RNU6-162P-201ENST00000516228 DSG3P32926 999 aa7.34□□□□□ -1.23
RNU6-162P-201ENST00000516228 CAPN15O75808 1086 aa7.26□□□□□ -1.25
RNU6-162P-201ENST00000516228 SP7Q8TDD2 431 aaPredicted RBP7.19□□□□□ -1.26
RNU6-162P-201ENST00000516228 RBM42Q9BTD8 480 aaKnown RBP7.17□□□□□ -1.26
RNU6-162P-201ENST00000516228 SPINK5Q9NQ38 1064 aaPredicted RBP7.15□□□□□ -1.26
RNU6-162P-201ENST00000516228 NCBP3Q53F19 620 aaKnown RBP7.14□□□□□ -1.27
RNU6-162P-201ENST00000516228 APLP2Q06481 763 aa7.13□□□□□ -1.27
RNU6-162P-201ENST00000516228 U3KPZ7 1027 aaPredicted RBP7.13□□□□□ -1.27
RNU6-162P-201ENST00000516228 CHRDL2Q6WN34 429 aa7.12□□□□□ -1.27
RNU6-162P-201ENST00000516228 ZNF219Q9P2Y4 722 aaPredicted RBP7.08□□□□□ -1.28
RNU6-162P-201ENST00000516228 TRHP20396 242 aaPredicted RBP6.96□□□□□ -1.3
RNU6-162P-201ENST00000516228 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.95□□□□□ -1.3
RNU6-162P-201ENST00000516228 HNRNPUL2Q1KMD3 747 aaKnown RBP6.95□□□□□ -1.3
RNU6-162P-201ENST00000516228 ABCB7O75027 752 aa6.94□□□□□ -1.3
RNU6-162P-201ENST00000516228 NPM3O75607 178 aaKnown RBP6.87□□□□□ -1.31
RNU6-162P-201ENST00000516228 HAX1O00165 279 aa6.86□□□□□ -1.31
RNU6-162P-201ENST00000516228 AKT1S1Q96B36 256 aa6.84□□□□□ -1.31
RNU6-162P-201ENST00000516228 SAMD1Q6SPF0 538 aaPredicted RBP6.82□□□□□ -1.32
RNU6-162P-201ENST00000516228 PIP4P2Q8N4L2 257 aa6.79□□□□□ -1.32
RNU6-162P-201ENST00000516228 LHX8Q68G74 356 aa6.72□□□□□ -1.33
RNU6-162P-201ENST00000516228 PLSCR2Q9NRY7 297 aa6.72□□□□□ -1.33
RNU6-162P-201ENST00000516228 FXR2P51116 673 aaKnown RBP eCLIP6.7□□□□□ -1.34
RNU6-162P-201ENST00000516228 REM2Q8IYK8 340 aaPredicted RBP6.69□□□□□ -1.34
RNU6-162P-201ENST00000516228 SLC4A2P04920 1241 aa6.67□□□□□ -1.34
RNU6-162P-201ENST00000516228 ZBTB12Q9Y330 459 aaPredicted RBP6.67□□□□□ -1.34
RNU6-162P-201ENST00000516228 POLA2Q14181 598 aa6.65□□□□□ -1.34
RNU6-162P-201ENST00000516228 PITPNM1O00562 1244 aa6.59□□□□□ -1.35
RNU6-162P-201ENST00000516228 EVX2Q03828 476 aa6.57□□□□□ -1.36
RNU6-162P-201ENST00000516228 GABBR2O75899 941 aa6.52□□□□□ -1.37
RNU6-162P-201ENST00000516228 C19orf67A6NJJ6 358 aa6.51□□□□□ -1.37
RNU6-162P-201ENST00000516228 CLCN6P51797 869 aa6.48□□□□□ -1.37
RNU6-162P-201ENST00000516228 PCDH10Q9P2E7 1040 aa6.47□□□□□ -1.37
RNU6-162P-201ENST00000516228 MYCNP04198 464 aaPredicted RBP6.46□□□□□ -1.38
RNU6-162P-201ENST00000516228 OSCARQ8IYS5 282 aa6.44□□□□□ -1.38
RNU6-162P-201ENST00000516228 PRKAR2AP13861 404 aaKnown RBP6.43□□□□□ -1.38
RNU6-162P-201ENST00000516228 SPDYE1Q8NFV5 336 aaPredicted RBP6.37□□□□□ -1.39
RNU6-162P-201ENST00000516228 SPDYE2BA6NHP3 402 aa6.35□□□□□ -1.39
RNU6-162P-201ENST00000516228 SPDYE6P0CI01 402 aa6.35□□□□□ -1.39
RNU6-162P-201ENST00000516228 SPDYE2Q495Y8 402 aa6.35□□□□□ -1.39
RNU6-162P-201ENST00000516228 POTEMA6NI47 508 aa6.34□□□□□ -1.39
RNU6-162P-201ENST00000516228 POTEIP0CG38 1075 aa6.3□□□□□ -1.4
RNU6-162P-201ENST00000516228 POTEGQ6S5H5 508 aa6.3□□□□□ -1.4
RNU6-162P-201ENST00000516228 DCBLD2Q96PD2 775 aa6.29□□□□□ -1.4
RNU6-162P-201ENST00000516228 CLEC11AQ9Y240 323 aa6.29□□□□□ -1.4
RNU6-162P-201ENST00000516228 OTUD5Q96G74 571 aa6.23□□□□□ -1.41
RNU6-162P-201ENST00000516228 CD44P16070 742 aaKnown RBP6.21□□□□□ -1.42
RNU6-162P-201ENST00000516228 FBLN2P98095 1184 aa6.19□□□□□ -1.42
RNU6-162P-201ENST00000516228 KCNA4P22459 653 aa6.17□□□□□ -1.42
RNU6-162P-201ENST00000516228 PRR29P0C7W0 189 aa6.16□□□□□ -1.42
RNU6-162P-201ENST00000516228 ATF5Q9Y2D1 282 aaPredicted RBP6.16□□□□□ -1.42
RNU6-162P-201ENST00000516228 CHADLQ6NUI6 762 aa6.15□□□□□ -1.42
RNU6-162P-201ENST00000516228 ZNF579Q8NAF0 562 aaKnown RBP6.13□□□□□ -1.43
RNU6-162P-201ENST00000516228 SSUH2Q9Y2M2 353 aa6.13□□□□□ -1.43
RNU6-162P-201ENST00000516228 MAMSTRQ6ZN01 415 aa6.12□□□□□ -1.43
RNU6-162P-201ENST00000516228 ZNF692Q9BU19 519 aaPredicted RBP6.11□□□□□ -1.43
RNU6-162P-201ENST00000516228 FARP1Q9Y4F1 1045 aaPredicted RBP6.11□□□□□ -1.43
RNU6-162P-201ENST00000516228 POTEB2H3BUK9 544 aa6.06□□□□□ -1.44
RNU6-162P-201ENST00000516228 FOXD4L1Q9NU39 408 aa6.05□□□□□ -1.44
RNU6-162P-201ENST00000516228 ATXN8OSP0DMR3 200 aa6.03□□□□□ -1.44
RNU6-162P-201ENST00000516228 ZRANB1Q9UGI0 708 aa6.02□□□□□ -1.45
RNU6-162P-201ENST00000516228 C7P10643 843 aa6□□□□□ -1.45
RNU6-162P-201ENST00000516228 SCUBE2Q9NQ36 999 aa6□□□□□ -1.45
RNU6-162P-201ENST00000516228 GALR2O43603 387 aaPredicted RBP5.99□□□□□ -1.45
RNU6-162P-201ENST00000516228 SLC39A7Q92504 469 aa5.99□□□□□ -1.45
RNU6-162P-201ENST00000516228 FAM163AQ96GL9 167 aaPredicted RBP5.99□□□□□ -1.45
RNU6-162P-201ENST00000516228 PAK3O75914 559 aaPredicted RBP5.97□□□□□ -1.45
RNU6-162P-201ENST00000516228 LCE2DQ5TA82 110 aaPredicted RBP5.96□□□□□ -1.46
RNU6-162P-201ENST00000516228 PABPN1Q86U42 306 aaKnown RBP eCLIP5.96□□□□□ -1.46
RNU6-162P-201ENST00000516228 CDAN1Q8IWY9 1227 aa5.96□□□□□ -1.46
RNU6-162P-201ENST00000516228 METRNQ9UJH8 293 aa5.95□□□□□ -1.46
RNU6-162P-201ENST00000516228 ASTLQ6HA08 431 aaPredicted RBP5.92□□□□□ -1.46
RNU6-162P-201ENST00000516228 MKRN4PQ13434 485 aaPredicted RBP5.89□□□□□ -1.47
RNU6-162P-201ENST00000516228 PELP1Q8IZL8 1130 aaKnown RBP5.89□□□□□ -1.47
RNU6-162P-201ENST00000516228 POTEJP0CG39 1038 aa5.87□□□□□ -1.47
RNU6-162P-201ENST00000516228 MMRN1Q13201 1228 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms