RNA–Protein interactions for RNA: ENST00000381337.6

THUMPD1-201, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 4,122 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-201ENST00000381337 NISCHQ9Y2I1 1504 aa19.31■□□□□ 0.68
THUMPD1-201ENST00000381337 SUPT5HO00267 1087 aaKnown RBP18.96■□□□□ 0.63
THUMPD1-201ENST00000381337 DCAF8L2P0C7V8 631 aa18.91■□□□□ 0.62
THUMPD1-201ENST00000381337 SHROOM4Q9ULL8 1493 aa18.58■□□□□ 0.56
THUMPD1-201ENST00000381337 PCGF6Q9BYE7 350 aa18.44■□□□□ 0.54
THUMPD1-201ENST00000381337 PELP1Q8IZL8 1130 aaKnown RBP18.29■□□□□ 0.52
THUMPD1-201ENST00000381337 HRCP23327 699 aa18.08■□□□□ 0.49
THUMPD1-201ENST00000381337 EHMT2Q96KQ7 1210 aa18.02■□□□□ 0.48
THUMPD1-201ENST00000381337 ZEB1P37275 1124 aaPredicted RBP17.98■□□□□ 0.47
THUMPD1-201ENST00000381337 MYT1Q01538 1121 aa17.88■□□□□ 0.45
THUMPD1-201ENST00000381337 CENPBP07199 599 aaPredicted RBP17.87■□□□□ 0.45
THUMPD1-201ENST00000381337 FAM9AQ8IZU1 332 aaPredicted RBP17.77■□□□□ 0.44
THUMPD1-201ENST00000381337 PPARGC1BQ86YN6 1023 aaKnown RBP17.7■□□□□ 0.42
THUMPD1-201ENST00000381337 TRIM26Q12899 539 aaPredicted RBP17.64■□□□□ 0.41
THUMPD1-201ENST00000381337 CCER1Q8TC90 406 aaPredicted RBP17.63■□□□□ 0.41
THUMPD1-201ENST00000381337 CHIC1Q5VXU3 224 aa17.55■□□□□ 0.4
THUMPD1-201ENST00000381337 TTBK1Q5TCY1 1321 aaPredicted RBP17.53■□□□□ 0.4
THUMPD1-201ENST00000381337 TRIM41Q8WV44 630 aa17.51■□□□□ 0.39
THUMPD1-201ENST00000381337 LOC105371045A0A1W2PR82 267 aa17.43■□□□□ 0.38
THUMPD1-201ENST00000381337 APLP2Q06481 763 aa17.43■□□□□ 0.38
THUMPD1-201ENST00000381337 YTHDC1Q96MU7 727 aaKnown RBP17.39■□□□□ 0.37
THUMPD1-201ENST00000381337 ERICH6Q7L0X2 663 aa17.2■□□□□ 0.34
THUMPD1-201ENST00000381337 DIEXFQ68CQ4 756 aaKnown RBP17.08■□□□□ 0.33
THUMPD1-201ENST00000381337 GTF3C3Q9Y5Q9 886 aa17.06■□□□□ 0.32
THUMPD1-201ENST00000381337 UBTFP17480 764 aaKnown RBP17.05■□□□□ 0.32
THUMPD1-201ENST00000381337 NEFLP07196 543 aa17.04■□□□□ 0.32
THUMPD1-201ENST00000381337 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.02■□□□□ 0.32
THUMPD1-201ENST00000381337 RANGAP1P46060 587 aaPredicted RBP16.97■□□□□ 0.31
THUMPD1-201ENST00000381337 ACIN1Q9UKV3 1341 aaKnown RBP16.95■□□□□ 0.3
THUMPD1-201ENST00000381337 SCAF1Q9H7N4 1312 aaKnown RBP16.8■□□□□ 0.28
THUMPD1-201ENST00000381337 HNRNPUL2Q1KMD3 747 aaKnown RBP16.79■□□□□ 0.28
THUMPD1-201ENST00000381337 DCAF1Q9Y4B6 1507 aa16.71■□□□□ 0.27
THUMPD1-201ENST00000381337 NEUROD1Q13562 356 aa16.67■□□□□ 0.26
THUMPD1-201ENST00000381337 ZNF316A6NFI3 1004 aaPredicted RBP16.66■□□□□ 0.26
THUMPD1-201ENST00000381337 ATP1B4Q9UN42 357 aaPredicted RBP16.59■□□□□ 0.25
THUMPD1-201ENST00000381337 ITGAEP38570 1179 aa16.54■□□□□ 0.24
THUMPD1-201ENST00000381337 BCANQ96GW7 911 aa16.5■□□□□ 0.23
THUMPD1-201ENST00000381337 MYO15BQ96JP2 1530 aa16.5■□□□□ 0.23
THUMPD1-201ENST00000381337 CLSPNQ9HAW4 1339 aa16.34■□□□□ 0.21
THUMPD1-201ENST00000381337 RTL5Q5HYW3 569 aaPredicted RBP16.34■□□□□ 0.21
THUMPD1-201ENST00000381337 CDK11AQ9UQ88 783 aaPredicted RBP16.27■□□□□ 0.19
THUMPD1-201ENST00000381337 DAXXQ9UER7 740 aaPredicted RBP16.26■□□□□ 0.19
THUMPD1-201ENST00000381337 MIER1Q8N108 512 aa16.23■□□□□ 0.19
THUMPD1-201ENST00000381337 ANP32CO43423 234 aa16.2■□□□□ 0.18
THUMPD1-201ENST00000381337 FKBP8Q14318 412 aa16.18■□□□□ 0.18
THUMPD1-201ENST00000381337 POLR3GLQ9BT43 218 aa16.18■□□□□ 0.18
THUMPD1-201ENST00000381337 CCDC180Q9P1Z9 1646 aa16.18■□□□□ 0.18
THUMPD1-201ENST00000381337 CNGB1Q14028 1251 aaPredicted RBP16.16■□□□□ 0.18
THUMPD1-201ENST00000381337 ZCCHC6Q5VYS8 1495 aaKnown RBP16.14■□□□□ 0.17
THUMPD1-201ENST00000381337 CSRNP3Q8WYN3 585 aa16.13■□□□□ 0.17
THUMPD1-201ENST00000381337 FAM50AQ14320 339 aaKnown RBP16.08■□□□□ 0.17
THUMPD1-201ENST00000381337 ANP32EQ9BTT0 268 aa16.06■□□□□ 0.16
THUMPD1-201ENST00000381337 DDX10Q13206 875 aaKnown RBP15.96■□□□□ 0.15
THUMPD1-201ENST00000381337 MYT1LQ9UL68 1186 aa15.96■□□□□ 0.15
THUMPD1-201ENST00000381337 ANP32AP39687 249 aaKnown RBP15.93■□□□□ 0.14
THUMPD1-201ENST00000381337 TRIM52Q96A61 297 aa15.91■□□□□ 0.14
THUMPD1-201ENST00000381337 HNRNPUQ00839 825 aaKnown RBP eCLIP15.88■□□□□ 0.13
THUMPD1-201ENST00000381337 SUPT16HQ9Y5B9 1047 aaKnown RBP15.87■□□□□ 0.13
THUMPD1-201ENST00000381337 BCL11AQ9H165 835 aa15.84■□□□□ 0.13
THUMPD1-201ENST00000381337 NBR1Q14596 966 aa15.8■□□□□ 0.12
THUMPD1-201ENST00000381337 EIF5BO60841 1220 aaKnown RBP15.78■□□□□ 0.12
THUMPD1-201ENST00000381337 NPM2Q86SE8 214 aaKnown RBP15.78■□□□□ 0.12
THUMPD1-201ENST00000381337 IRX6P78412 446 aaPredicted RBP15.74■□□□□ 0.11
THUMPD1-201ENST00000381337 CEP162Q5TB80 1403 aa15.73■□□□□ 0.11
THUMPD1-201ENST00000381337 ZBTB47Q9UFB7 747 aaPredicted RBP15.73■□□□□ 0.11
THUMPD1-201ENST00000381337 RSF1Q96T23 1441 aaPredicted RBP15.71■□□□□ 0.11
THUMPD1-201ENST00000381337 TONSLQ96HA7 1378 aa15.71■□□□□ 0.11
THUMPD1-201ENST00000381337 FAM9BQ8IZU0 186 aa15.7■□□□□ 0.1
THUMPD1-201ENST00000381337 ZNF326Q5BKZ1 582 aaKnown RBP15.68■□□□□ 0.1
THUMPD1-201ENST00000381337 HIRIP3Q9BW71 556 aaPredicted RBP15.67■□□□□ 0.1
THUMPD1-201ENST00000381337 CCDC136Q96JN2 1154 aa15.67■□□□□ 0.1
THUMPD1-201ENST00000381337 ABCC9O60706 1549 aa15.66■□□□□ 0.1
THUMPD1-201ENST00000381337 PABPN1Q86U42 306 aaKnown RBP eCLIP15.65■□□□□ 0.1
THUMPD1-201ENST00000381337 CLIP1P30622 1438 aa15.65■□□□□ 0.1
THUMPD1-201ENST00000381337 TSHZ2Q9NRE2 1034 aa15.65■□□□□ 0.1
THUMPD1-201ENST00000381337 P3H3Q8IVL6 736 aa15.63■□□□□ 0.09
THUMPD1-201ENST00000381337 SCRIBQ14160 1630 aa15.63■□□□□ 0.09
THUMPD1-201ENST00000381337 RBM19Q9Y4C8 960 aaKnown RBP15.62■□□□□ 0.09
THUMPD1-201ENST00000381337 TNIKQ9UKE5 1360 aa15.61■□□□□ 0.09
THUMPD1-201ENST00000381337 MRS2Q9HD23 443 aa15.58■□□□□ 0.08
THUMPD1-201ENST00000381337 EEA1Q15075 1411 aa15.56■□□□□ 0.08
THUMPD1-201ENST00000381337 GOLGA3Q08378 1498 aa15.53■□□□□ 0.08
THUMPD1-201ENST00000381337 PPP4R2Q9NY27 417 aa15.49■□□□□ 0.07
THUMPD1-201ENST00000381337 GLIPR1L2Q4G1C9 344 aa15.47■□□□□ 0.07
THUMPD1-201ENST00000381337 DEKP35659 375 aaKnown RBP15.47■□□□□ 0.07
THUMPD1-201ENST00000381337 TMC1Q8TDI8 760 aa15.46■□□□□ 0.07
THUMPD1-201ENST00000381337 SLC4A1APQ9BWU0 796 aaKnown RBP15.46■□□□□ 0.07
THUMPD1-201ENST00000381337 SALL2Q9Y467 1007 aaPredicted RBP15.46■□□□□ 0.07
THUMPD1-201ENST00000381337 NOP58Q9Y2X3 529 aaKnown RBP15.45■□□□□ 0.06
THUMPD1-201ENST00000381337 EIF4G2P78344 907 aaKnown RBP eCLIP15.43■□□□□ 0.06
THUMPD1-201ENST00000381337 CANXP27824 592 aaKnown RBP15.42■□□□□ 0.06
THUMPD1-201ENST00000381337 SIN3AQ96ST3 1273 aa15.41■□□□□ 0.06
THUMPD1-201ENST00000381337 RB1CC1Q8TDY2 1594 aa15.41■□□□□ 0.06
THUMPD1-201ENST00000381337 RTN4Q9NQC3 1192 aaKnown RBP15.4■□□□□ 0.06
THUMPD1-201ENST00000381337 B4GALNT3Q6L9W6 998 aa15.4■□□□□ 0.06
THUMPD1-201ENST00000381337 CCER2I3L3R5 266 aa15.39■□□□□ 0.05
THUMPD1-201ENST00000381337 CEP164Q9UPV0 1460 aa15.35■□□□□ 0.05
THUMPD1-201ENST00000381337 PPM1GO15355 546 aaPredicted RBP15.35■□□□□ 0.05
THUMPD1-201ENST00000381337 CHIC2Q9UKJ5 165 aa15.35■□□□□ 0.05
THUMPD1-201ENST00000381337 NEFMP07197 916 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms