RNA–Protein interactions for RNA: ENST00000529417.1

AP001999.2-201, humanhuman

TSL 3 BASIC

Gene AP001999.2, Length 389 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001999.2-201ENST00000529417 CHIC1Q5VXU3 224 aa13.32□□□□□ -0.28
AP001999.2-201ENST00000529417 AEBP2Q6ZN18 517 aaPredicted RBP12.93□□□□□ -0.34
AP001999.2-201ENST00000529417 PHF23Q9BUL5 403 aaPredicted RBP11.75□□□□□ -0.53
AP001999.2-201ENST00000529417 PLPPR3Q6T4P5 718 aa11.16□□□□□ -0.62
AP001999.2-201ENST00000529417 POTEDQ86YR6 584 aa11.04□□□□□ -0.64
AP001999.2-201ENST00000529417 SENP3Q9H4L4 574 aaPredicted RBP10.93□□□□□ -0.66
AP001999.2-201ENST00000529417 EHMT2Q96KQ7 1210 aa10.61□□□□□ -0.71
AP001999.2-201ENST00000529417 KCNA4P22459 653 aa10.43□□□□□ -0.74
AP001999.2-201ENST00000529417 ADRA2BP18089 450 aa10.38□□□□□ -0.75
AP001999.2-201ENST00000529417 PPP6R1Q9UPN7 881 aa10.16□□□□□ -0.78
AP001999.2-201ENST00000529417 CSRNP3Q8WYN3 585 aa10.1□□□□□ -0.79
AP001999.2-201ENST00000529417 SLC4A1APQ9BWU0 796 aaKnown RBP10.09□□□□□ -0.79
AP001999.2-201ENST00000529417 FOXD1Q16676 465 aa10.03□□□□□ -0.8
AP001999.2-201ENST00000529417 PPP4R3CPQ6ZMV5 832 aa9.91□□□□□ -0.82
AP001999.2-201ENST00000529417 NCBP3Q53F19 620 aaKnown RBP9.89□□□□□ -0.83
AP001999.2-201ENST00000529417 DNAJC5BQ9UF47 199 aa9.77□□□□□ -0.85
AP001999.2-201ENST00000529417 SLC24A1O60721 1099 aa9.72□□□□□ -0.85
AP001999.2-201ENST00000529417 NPM3O75607 178 aaKnown RBP9.68□□□□□ -0.86
AP001999.2-201ENST00000529417 PIAS4Q8N2W9 510 aaPredicted RBP9.68□□□□□ -0.86
AP001999.2-201ENST00000529417 DNAJC5Q9H3Z4 198 aa9.67□□□□□ -0.86
AP001999.2-201ENST00000529417 ZBTB22O15209 634 aa9.57□□□□□ -0.88
AP001999.2-201ENST00000529417 AMER1Q5JTC6 1135 aaPredicted RBP9.53□□□□□ -0.88
AP001999.2-201ENST00000529417 ABCC9O60706 1549 aa9.51□□□□□ -0.89
AP001999.2-201ENST00000529417 CNKSR2Q8WXI2 1034 aa9.49□□□□□ -0.89
AP001999.2-201ENST00000529417 RTN4Q9NQC3 1192 aaKnown RBP9.49□□□□□ -0.89
AP001999.2-201ENST00000529417 FOXD4L1Q9NU39 408 aa9.43□□□□□ -0.9
AP001999.2-201ENST00000529417 SCAF1Q9H7N4 1312 aaKnown RBP9.42□□□□□ -0.9
AP001999.2-201ENST00000529417 FKBP8Q14318 412 aa9.15□□□□□ -0.94
AP001999.2-201ENST00000529417 RNF216Q9NWF9 866 aaPredicted RBP9.12□□□□□ -0.95
AP001999.2-201ENST00000529417 MAPK8IP2Q13387 824 aaPredicted RBP9.07□□□□□ -0.96
AP001999.2-201ENST00000529417 NISCHQ9Y2I1 1504 aa9.06□□□□□ -0.96
AP001999.2-201ENST00000529417 MSH5O43196 834 aa9.03□□□□□ -0.96
AP001999.2-201ENST00000529417 ATXN8OSP0DMR3 200 aa9.02□□□□□ -0.97
AP001999.2-201ENST00000529417 MYCNP04198 464 aaPredicted RBP8.96□□□□□ -0.98
AP001999.2-201ENST00000529417 SLC4A2P04920 1241 aa8.95□□□□□ -0.98
AP001999.2-201ENST00000529417 TRIM41Q8WV44 630 aa8.9□□□□□ -0.98
AP001999.2-201ENST00000529417 HOXD11P31277 338 aaPredicted RBP8.88□□□□□ -0.99
AP001999.2-201ENST00000529417 DMRT2Q9Y5R5 561 aa8.81□□□□□ -1
AP001999.2-201ENST00000529417 PLCB2Q00722 1185 aa8.74□□□□□ -1.01
AP001999.2-201ENST00000529417 PABPN1Q86U42 306 aaKnown RBP eCLIP8.69□□□□□ -1.02
AP001999.2-201ENST00000529417 HAP1P54257 671 aaPredicted RBP8.68□□□□□ -1.02
AP001999.2-201ENST00000529417 BCANQ96GW7 911 aa8.65□□□□□ -1.02
AP001999.2-201ENST00000529417 FBXO3Q9UK99 471 aa8.65□□□□□ -1.02
AP001999.2-201ENST00000529417 CECR2Q9BXF3 1484 aa8.64□□□□□ -1.03
AP001999.2-201ENST00000529417 DCAF8L2P0C7V8 631 aa8.63□□□□□ -1.03
AP001999.2-201ENST00000529417 ATF5Q9Y2D1 282 aaPredicted RBP8.62□□□□□ -1.03
AP001999.2-201ENST00000529417 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.61□□□□□ -1.03
AP001999.2-201ENST00000529417 HNRNPUL2Q1KMD3 747 aaKnown RBP8.61□□□□□ -1.03
AP001999.2-201ENST00000529417 SAMD1Q6SPF0 538 aaPredicted RBP8.6□□□□□ -1.03
AP001999.2-201ENST00000529417 RB1CC1Q8TDY2 1594 aa8.59□□□□□ -1.03
AP001999.2-201ENST00000529417 CUX2O14529 1486 aa8.56□□□□□ -1.04
AP001999.2-201ENST00000529417 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.55□□□□□ -1.04
AP001999.2-201ENST00000529417 PRKCSHP14314 528 aaPredicted RBP8.54□□□□□ -1.04
AP001999.2-201ENST00000529417 CCDC180Q9P1Z9 1646 aa8.54□□□□□ -1.04
AP001999.2-201ENST00000529417 CC2D2AQ9P2K1 1620 aa8.54□□□□□ -1.04
AP001999.2-201ENST00000529417 VSIG10Q8N0Z9 540 aa8.52□□□□□ -1.05
AP001999.2-201ENST00000529417 TAOK2Q9UL54 1235 aa8.52□□□□□ -1.05
AP001999.2-201ENST00000529417 DCAF8L1A6NGE4 600 aa8.51□□□□□ -1.05
AP001999.2-201ENST00000529417 ILDR1Q86SU0 546 aaPredicted RBP8.51□□□□□ -1.05
AP001999.2-201ENST00000529417 SPDYE4A6NLX3 237 aa8.49□□□□□ -1.05
AP001999.2-201ENST00000529417 VASPP50552 380 aaPredicted RBP8.48□□□□□ -1.05
AP001999.2-201ENST00000529417 UNC13AQ9UPW8 1703 aa8.47□□□□□ -1.05
AP001999.2-201ENST00000529417 ZNF219Q9P2Y4 722 aaPredicted RBP8.45□□□□□ -1.06
AP001999.2-201ENST00000529417 TPRNQ4KMQ1 711 aa8.41□□□□□ -1.06
AP001999.2-201ENST00000529417 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.41□□□□□ -1.06
AP001999.2-201ENST00000529417 U3KPZ7 1027 aaPredicted RBP8.41□□□□□ -1.06
AP001999.2-201ENST00000529417 IFNLR1Q8IU57 520 aaPredicted RBP8.39□□□□□ -1.07
AP001999.2-201ENST00000529417 BICRAQ9NZM4 1560 aa8.39□□□□□ -1.07
AP001999.2-201ENST00000529417 APLP2Q06481 763 aa8.38□□□□□ -1.07
AP001999.2-201ENST00000529417 PKD2Q13563 968 aa8.36□□□□□ -1.07
AP001999.2-201ENST00000529417 PROM2Q8N271 834 aa8.35□□□□□ -1.07
AP001999.2-201ENST00000529417 BBXQ8WY36 941 aaPredicted RBP8.33□□□□□ -1.08
AP001999.2-201ENST00000529417 POTEHQ6S545 545 aa8.32□□□□□ -1.08
AP001999.2-201ENST00000529417 FBLN2P98095 1184 aa8.31□□□□□ -1.08
AP001999.2-201ENST00000529417 PAXIP1Q6ZW49 1069 aaPredicted RBP8.31□□□□□ -1.08
AP001999.2-201ENST00000529417 CFAP44Q96MT7 982 aa8.31□□□□□ -1.08
AP001999.2-201ENST00000529417 KDM2AQ9Y2K7 1162 aa8.3□□□□□ -1.08
AP001999.2-201ENST00000529417 NACADO15069 1562 aa8.28□□□□□ -1.08
AP001999.2-201ENST00000529417 MKRN4PQ13434 485 aaPredicted RBP8.28□□□□□ -1.08
AP001999.2-201ENST00000529417 ERCC6Q03468 1493 aa8.27□□□□□ -1.09
AP001999.2-201ENST00000529417 ECM2O94769 699 aaPredicted RBP8.26□□□□□ -1.09
AP001999.2-201ENST00000529417 KLHL34Q8N239 644 aa8.26□□□□□ -1.09
AP001999.2-201ENST00000529417 EIF4G1Q04637 1599 aaKnown RBP8.26□□□□□ -1.09
AP001999.2-201ENST00000529417 SPOCK2Q92563 424 aa8.23□□□□□ -1.09
AP001999.2-201ENST00000529417 SPRYD3Q8NCJ5 442 aa8.21□□□□□ -1.1
AP001999.2-201ENST00000529417 NPM1P06748 294 aaKnown RBP eCLIP8.19□□□□□ -1.1
AP001999.2-201ENST00000529417 CACNB1Q02641 598 aaPredicted RBP8.17□□□□□ -1.1
AP001999.2-201ENST00000529417 NBR1Q14596 966 aa8.17□□□□□ -1.1
AP001999.2-201ENST00000529417 TRHP20396 242 aaPredicted RBP8.16□□□□□ -1.1
AP001999.2-201ENST00000529417 TSHZ2Q9NRE2 1034 aa8.15□□□□□ -1.1
AP001999.2-201ENST00000529417 RGL2O15211 777 aa8.11□□□□□ -1.11
AP001999.2-201ENST00000529417 POLA2Q14181 598 aa8.11□□□□□ -1.11
AP001999.2-201ENST00000529417 SHROOM4Q9ULL8 1493 aa8.11□□□□□ -1.11
AP001999.2-201ENST00000529417 PLCD3Q8N3E9 789 aa8.09□□□□□ -1.11
AP001999.2-201ENST00000529417 TULP1O00294 542 aaPredicted RBP8.08□□□□□ -1.12
AP001999.2-201ENST00000529417 CHGAP10645 457 aaKnown RBP8.08□□□□□ -1.12
AP001999.2-201ENST00000529417 TIMELESSQ9UNS1 1208 aa8.08□□□□□ -1.12
AP001999.2-201ENST00000529417 STAG3Q9UJ98 1225 aa8.07□□□□□ -1.12
AP001999.2-201ENST00000529417 RIMBP3CA6NJZ7 1639 aa8.06□□□□□ -1.12
AP001999.2-201ENST00000529417 RIMBP3BA6NNM3 1639 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms