RNA–Protein interactions for RNA: ENST00000516998.1

RNU6-1006P-201, Transcript of RNA, U6 small nuclear 1006, pseudogene, humanhuman

BASIC

Gene RNU6-1006P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1006P-201ENST00000516998 AEBP2Q6ZN18 517 aaPredicted RBP12.06□□□□□ -0.48
RNU6-1006P-201ENST00000516998 CHIC1Q5VXU3 224 aa11.1□□□□□ -0.63
RNU6-1006P-201ENST00000516998 POTEDQ86YR6 584 aa10.56□□□□□ -0.72
RNU6-1006P-201ENST00000516998 SENP3Q9H4L4 574 aaPredicted RBP10.27□□□□□ -0.77
RNU6-1006P-201ENST00000516998 PHF23Q9BUL5 403 aaPredicted RBP10.08□□□□□ -0.8
RNU6-1006P-201ENST00000516998 FOXD1Q16676 465 aa9.77□□□□□ -0.85
RNU6-1006P-201ENST00000516998 MSH5O43196 834 aa9.33□□□□□ -0.92
RNU6-1006P-201ENST00000516998 PIAS4Q8N2W9 510 aaPredicted RBP8.92□□□□□ -0.98
RNU6-1006P-201ENST00000516998 PPP6R1Q9UPN7 881 aa8.57□□□□□ -1.04
RNU6-1006P-201ENST00000516998 CACNB1Q02641 598 aaPredicted RBP8.55□□□□□ -1.04
RNU6-1006P-201ENST00000516998 ADRA2BP18089 450 aa8.49□□□□□ -1.05
RNU6-1006P-201ENST00000516998 POTEHQ6S545 545 aa8.09□□□□□ -1.11
RNU6-1006P-201ENST00000516998 MAPK8IP2Q13387 824 aaPredicted RBP8.06□□□□□ -1.12
RNU6-1006P-201ENST00000516998 PLPPR3Q6T4P5 718 aa8.06□□□□□ -1.12
RNU6-1006P-201ENST00000516998 DMRT2Q9Y5R5 561 aa8.05□□□□□ -1.12
RNU6-1006P-201ENST00000516998 RNF39Q9H2S5 420 aa7.94□□□□□ -1.14
RNU6-1006P-201ENST00000516998 DCAF8L1A6NGE4 600 aa7.83□□□□□ -1.16
RNU6-1006P-201ENST00000516998 C1QBPQ07021 282 aaKnown RBP7.72□□□□□ -1.17
RNU6-1006P-201ENST00000516998 SCAF1Q9H7N4 1312 aaKnown RBP7.58□□□□□ -1.2
RNU6-1006P-201ENST00000516998 HOXD11P31277 338 aaPredicted RBP7.42□□□□□ -1.22
RNU6-1006P-201ENST00000516998 SP7Q8TDD2 431 aaPredicted RBP7.21□□□□□ -1.26
RNU6-1006P-201ENST00000516998 DNAJC5BQ9UF47 199 aa7.2□□□□□ -1.26
RNU6-1006P-201ENST00000516998 DSG3P32926 999 aa7.19□□□□□ -1.26
RNU6-1006P-201ENST00000516998 RNF216Q9NWF9 866 aaPredicted RBP7.14□□□□□ -1.27
RNU6-1006P-201ENST00000516998 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.1□□□□□ -1.27
RNU6-1006P-201ENST00000516998 SPINK5Q9NQ38 1064 aaPredicted RBP7.08□□□□□ -1.28
RNU6-1006P-201ENST00000516998 CAPN15O75808 1086 aa7.06□□□□□ -1.28
RNU6-1006P-201ENST00000516998 PLSCR2Q9NRY7 297 aa7.06□□□□□ -1.28
RNU6-1006P-201ENST00000516998 CHRDL2Q6WN34 429 aa7.04□□□□□ -1.28
RNU6-1006P-201ENST00000516998 PPP4R3CPQ6ZMV5 832 aa7.01□□□□□ -1.29
RNU6-1006P-201ENST00000516998 CNKSR2Q8WXI2 1034 aa7.01□□□□□ -1.29
RNU6-1006P-201ENST00000516998 U3KPZ7 1027 aaPredicted RBP6.91□□□□□ -1.3
RNU6-1006P-201ENST00000516998 ABCB7O75027 752 aa6.89□□□□□ -1.31
RNU6-1006P-201ENST00000516998 HAX1O00165 279 aa6.8□□□□□ -1.32
RNU6-1006P-201ENST00000516998 RBM42Q9BTD8 480 aaKnown RBP6.78□□□□□ -1.32
RNU6-1006P-201ENST00000516998 TRHP20396 242 aaPredicted RBP6.77□□□□□ -1.33
RNU6-1006P-201ENST00000516998 EVX2Q03828 476 aa6.75□□□□□ -1.33
RNU6-1006P-201ENST00000516998 LHX8Q68G74 356 aa6.75□□□□□ -1.33
RNU6-1006P-201ENST00000516998 PIP4P2Q8N4L2 257 aa6.72□□□□□ -1.33
RNU6-1006P-201ENST00000516998 ZNF219Q9P2Y4 722 aaPredicted RBP6.62□□□□□ -1.35
RNU6-1006P-201ENST00000516998 FXR2P51116 673 aaKnown RBP eCLIP6.51□□□□□ -1.37
RNU6-1006P-201ENST00000516998 REM2Q8IYK8 340 aaPredicted RBP6.49□□□□□ -1.37
RNU6-1006P-201ENST00000516998 AKT1S1Q96B36 256 aa6.48□□□□□ -1.37
RNU6-1006P-201ENST00000516998 PITPNM1O00562 1244 aa6.47□□□□□ -1.37
RNU6-1006P-201ENST00000516998 GABBR2O75899 941 aa6.47□□□□□ -1.37
RNU6-1006P-201ENST00000516998 APLP2Q06481 763 aa6.45□□□□□ -1.38
RNU6-1006P-201ENST00000516998 NPM3O75607 178 aaKnown RBP6.44□□□□□ -1.38
RNU6-1006P-201ENST00000516998 POTEMA6NI47 508 aa6.43□□□□□ -1.38
RNU6-1006P-201ENST00000516998 NCBP3Q53F19 620 aaKnown RBP6.4□□□□□ -1.38
RNU6-1006P-201ENST00000516998 POLA2Q14181 598 aa6.39□□□□□ -1.39
RNU6-1006P-201ENST00000516998 POTEIP0CG38 1075 aa6.38□□□□□ -1.39
RNU6-1006P-201ENST00000516998 POTEGQ6S5H5 508 aa6.38□□□□□ -1.39
RNU6-1006P-201ENST00000516998 SLC4A2P04920 1241 aa6.37□□□□□ -1.39
RNU6-1006P-201ENST00000516998 C19orf67A6NJJ6 358 aa6.34□□□□□ -1.39
RNU6-1006P-201ENST00000516998 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.27□□□□□ -1.41
RNU6-1006P-201ENST00000516998 PRKAR2AP13861 404 aaKnown RBP6.27□□□□□ -1.41
RNU6-1006P-201ENST00000516998 HNRNPUL2Q1KMD3 747 aaKnown RBP6.27□□□□□ -1.41
RNU6-1006P-201ENST00000516998 OSCARQ8IYS5 282 aa6.26□□□□□ -1.41
RNU6-1006P-201ENST00000516998 OTUD5Q96G74 571 aa6.26□□□□□ -1.41
RNU6-1006P-201ENST00000516998 SAMD1Q6SPF0 538 aaPredicted RBP6.25□□□□□ -1.41
RNU6-1006P-201ENST00000516998 PCDH10Q9P2E7 1040 aa6.2□□□□□ -1.42
RNU6-1006P-201ENST00000516998 POTEB2H3BUK9 544 aa6.17□□□□□ -1.42
RNU6-1006P-201ENST00000516998 LCE2DQ5TA82 110 aaPredicted RBP6.12□□□□□ -1.43
RNU6-1006P-201ENST00000516998 CHADLQ6NUI6 762 aa6.1□□□□□ -1.43
RNU6-1006P-201ENST00000516998 DCBLD2Q96PD2 775 aa6.09□□□□□ -1.43
RNU6-1006P-201ENST00000516998 CLEC11AQ9Y240 323 aa6.08□□□□□ -1.44
RNU6-1006P-201ENST00000516998 ZBTB12Q9Y330 459 aaPredicted RBP6.07□□□□□ -1.44
RNU6-1006P-201ENST00000516998 CD44P16070 742 aaKnown RBP6.02□□□□□ -1.45
RNU6-1006P-201ENST00000516998 FAM163AQ96GL9 167 aaPredicted RBP6.01□□□□□ -1.45
RNU6-1006P-201ENST00000516998 ATF5Q9Y2D1 282 aaPredicted RBP5.97□□□□□ -1.45
RNU6-1006P-201ENST00000516998 CDAN1Q8IWY9 1227 aa5.96□□□□□ -1.46
RNU6-1006P-201ENST00000516998 SPDYE1Q8NFV5 336 aaPredicted RBP5.96□□□□□ -1.46
RNU6-1006P-201ENST00000516998 POTEJP0CG39 1038 aa5.95□□□□□ -1.46
RNU6-1006P-201ENST00000516998 GALR2O43603 387 aaPredicted RBP5.92□□□□□ -1.46
RNU6-1006P-201ENST00000516998 MYCNP04198 464 aaPredicted RBP5.9□□□□□ -1.46
RNU6-1006P-201ENST00000516998 MMRN1Q13201 1228 aa5.9□□□□□ -1.46
RNU6-1006P-201ENST00000516998 CLCN6P51797 869 aa5.89□□□□□ -1.47
RNU6-1006P-201ENST00000516998 PELP1Q8IZL8 1130 aaKnown RBP5.89□□□□□ -1.47
RNU6-1006P-201ENST00000516998 SPDYE2BA6NHP3 402 aa5.86□□□□□ -1.47
RNU6-1006P-201ENST00000516998 SPDYE6P0CI01 402 aa5.86□□□□□ -1.47
RNU6-1006P-201ENST00000516998 SPDYE2Q495Y8 402 aa5.86□□□□□ -1.47
RNU6-1006P-201ENST00000516998 ZNF579Q8NAF0 562 aaKnown RBP5.85□□□□□ -1.47
RNU6-1006P-201ENST00000516998 FARP1Q9Y4F1 1045 aaPredicted RBP5.84□□□□□ -1.47
RNU6-1006P-201ENST00000516998 SPNS2Q8IVW8 549 aa5.83□□□□□ -1.48
RNU6-1006P-201ENST00000516998 ZRANB1Q9UGI0 708 aa5.82□□□□□ -1.48
RNU6-1006P-201ENST00000516998 PRR29P0C7W0 189 aa5.81□□□□□ -1.48
RNU6-1006P-201ENST00000516998 METRNQ9UJH8 293 aa5.8□□□□□ -1.48
RNU6-1006P-201ENST00000516998 MAMSTRQ6ZN01 415 aa5.76□□□□□ -1.49
RNU6-1006P-201ENST00000516998 SCUBE2Q9NQ36 999 aa5.74□□□□□ -1.49
RNU6-1006P-201ENST00000516998 SSUH2Q9Y2M2 353 aa5.74□□□□□ -1.49
RNU6-1006P-201ENST00000516998 PHF12Q96QT6 1004 aa5.72□□□□□ -1.49
RNU6-1006P-201ENST00000516998 ZNF692Q9BU19 519 aaPredicted RBP5.72□□□□□ -1.49
RNU6-1006P-201ENST00000516998 SLC39A7Q92504 469 aa5.69□□□□□ -1.5
RNU6-1006P-201ENST00000516998 ST18O60284 1047 aa5.68□□□□□ -1.5
RNU6-1006P-201ENST00000516998 C7P10643 843 aa5.68□□□□□ -1.5
RNU6-1006P-201ENST00000516998 ASTLQ6HA08 431 aaPredicted RBP5.67□□□□□ -1.5
RNU6-1006P-201ENST00000516998 ATMINO43313 823 aaPredicted RBP5.66□□□□□ -1.5
RNU6-1006P-201ENST00000516998 KCNA4P22459 653 aa5.66□□□□□ -1.5
RNU6-1006P-201ENST00000516998 POTEFA5A3E0 1075 aa5.64□□□□□ -1.51
RNU6-1006P-201ENST00000516998 FBLN2P98095 1184 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms