Protein–RNA interactions for Protein: Q9UKV5

AMFR, E3 ubiquitin-protein ligase AMFR, humanhuman

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMFRQ9UKV5 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
AMFRQ9UKV5 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
AMFRQ9UKV5 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
AMFRQ9UKV5 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
AMFRQ9UKV5 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
AMFRQ9UKV5 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
AMFRQ9UKV5 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
AMFRQ9UKV5 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
AMFRQ9UKV5 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
AMFRQ9UKV5 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.7■□□□□ 0.9
AMFRQ9UKV5 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
AMFRQ9UKV5 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AMFRQ9UKV5 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AMFRQ9UKV5 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.7■□□□□ 0.9
AMFRQ9UKV5 AC006015.1-201ENST00000429970 570 ntBASIC20.7■□□□□ 0.9
AMFRQ9UKV5 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.7■□□□□ 0.9
AMFRQ9UKV5 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.7■□□□□ 0.9
AMFRQ9UKV5 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.7■□□□□ 0.9
AMFRQ9UKV5 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.7■□□□□ 0.9
AMFRQ9UKV5 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
AMFRQ9UKV5 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.7■□□□□ 0.9
AMFRQ9UKV5 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AMFRQ9UKV5 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AMFRQ9UKV5 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AMFRQ9UKV5 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AMFRQ9UKV5 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
AMFRQ9UKV5 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
AMFRQ9UKV5 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.7■□□□□ 0.9
AMFRQ9UKV5 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
AMFRQ9UKV5 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
AMFRQ9UKV5 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AMFRQ9UKV5 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AMFRQ9UKV5 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.69■□□□□ 0.9
AMFRQ9UKV5 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
AMFRQ9UKV5 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
AMFRQ9UKV5 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.69■□□□□ 0.9
AMFRQ9UKV5 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
AMFRQ9UKV5 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
AMFRQ9UKV5 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
AMFRQ9UKV5 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
AMFRQ9UKV5 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
AMFRQ9UKV5 AC007322.1-201ENST00000426983 750 ntBASIC20.69■□□□□ 0.9
AMFRQ9UKV5 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.69■□□□□ 0.9
AMFRQ9UKV5 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
AMFRQ9UKV5 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
AMFRQ9UKV5 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
AMFRQ9UKV5 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.69■□□□□ 0.9
AMFRQ9UKV5 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.69■□□□□ 0.9
AMFRQ9UKV5 OR10C1-204ENST00000622521 1039 ntBASIC20.69■□□□□ 0.9
AMFRQ9UKV5 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.69■□□□□ 0.9
AMFRQ9UKV5 AC093503.3-201ENST00000624917 2352 ntBASIC20.69■□□□□ 0.9
AMFRQ9UKV5 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
AMFRQ9UKV5 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.69■□□□□ 0.9
AMFRQ9UKV5 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
AMFRQ9UKV5 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
AMFRQ9UKV5 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
AMFRQ9UKV5 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
AMFRQ9UKV5 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
AMFRQ9UKV5 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
AMFRQ9UKV5 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
AMFRQ9UKV5 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
AMFRQ9UKV5 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
AMFRQ9UKV5 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
AMFRQ9UKV5 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
AMFRQ9UKV5 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.68■□□□□ 0.9
AMFRQ9UKV5 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.68■□□□□ 0.9
AMFRQ9UKV5 BID-214ENST00000617586 542 ntTSL 5 BASIC20.68■□□□□ 0.9
AMFRQ9UKV5 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
AMFRQ9UKV5 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.68■□□□□ 0.9
AMFRQ9UKV5 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.68■□□□□ 0.9
AMFRQ9UKV5 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
AMFRQ9UKV5 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
AMFRQ9UKV5 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.68■□□□□ 0.9
AMFRQ9UKV5 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
AMFRQ9UKV5 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
AMFRQ9UKV5 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
AMFRQ9UKV5 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
AMFRQ9UKV5 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
AMFRQ9UKV5 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
AMFRQ9UKV5 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
AMFRQ9UKV5 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.67■□□□□ 0.9
AMFRQ9UKV5 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.67■□□□□ 0.9
AMFRQ9UKV5 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.67■□□□□ 0.9
AMFRQ9UKV5 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.67■□□□□ 0.9
AMFRQ9UKV5 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
AMFRQ9UKV5 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
AMFRQ9UKV5 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
AMFRQ9UKV5 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
AMFRQ9UKV5 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.67■□□□□ 0.9
AMFRQ9UKV5 KRT17P1-201ENST00000399211 1546 ntBASIC20.67■□□□□ 0.9
AMFRQ9UKV5 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.67■□□□□ 0.9
AMFRQ9UKV5 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.67■□□□□ 0.9
AMFRQ9UKV5 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
AMFRQ9UKV5 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
AMFRQ9UKV5 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
AMFRQ9UKV5 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.67■□□□□ 0.9
AMFRQ9UKV5 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
AMFRQ9UKV5 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
AMFRQ9UKV5 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
AMFRQ9UKV5 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms