Protein–RNA interactions for Protein: Q9NST1

PNPLA3, Patatin-like phospholipase domain-containing protein 3, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNPLA3Q9NST1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PNPLA3Q9NST1 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PNPLA3Q9NST1 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PNPLA3Q9NST1 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.78■□□□□ 0.6
PNPLA3Q9NST1 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PNPLA3Q9NST1 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PNPLA3Q9NST1 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PNPLA3Q9NST1 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.78■□□□□ 0.6
PNPLA3Q9NST1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
PNPLA3Q9NST1 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PNPLA3Q9NST1 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.78■□□□□ 0.6
PNPLA3Q9NST1 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.78■□□□□ 0.6
PNPLA3Q9NST1 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.78■□□□□ 0.6
PNPLA3Q9NST1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.78■□□□□ 0.6
PNPLA3Q9NST1 AC243732.1-201ENST00000612648 864 ntBASIC18.78■□□□□ 0.6
PNPLA3Q9NST1 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.78■□□□□ 0.6
PNPLA3Q9NST1 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.78■□□□□ 0.6
PNPLA3Q9NST1 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PNPLA3Q9NST1 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.78■□□□□ 0.6
PNPLA3Q9NST1 TMEM179-206ENST00000616017 1645 ntBASIC18.78■□□□□ 0.6
PNPLA3Q9NST1 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PNPLA3Q9NST1 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
PNPLA3Q9NST1 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PNPLA3Q9NST1 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PNPLA3Q9NST1 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PNPLA3Q9NST1 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PNPLA3Q9NST1 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
PNPLA3Q9NST1 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.77■□□□□ 0.6
PNPLA3Q9NST1 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.77■□□□□ 0.6
PNPLA3Q9NST1 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.77■□□□□ 0.6
PNPLA3Q9NST1 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PNPLA3Q9NST1 AC092118.2-201ENST00000613495 667 ntBASIC18.77■□□□□ 0.6
PNPLA3Q9NST1 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.77■□□□□ 0.6
PNPLA3Q9NST1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PNPLA3Q9NST1 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PNPLA3Q9NST1 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PNPLA3Q9NST1 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PNPLA3Q9NST1 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.77■□□□□ 0.6
PNPLA3Q9NST1 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PNPLA3Q9NST1 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PNPLA3Q9NST1 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PNPLA3Q9NST1 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PNPLA3Q9NST1 AC120498.9-201ENST00000339021 3867 ntBASIC18.76■□□□□ 0.59
PNPLA3Q9NST1 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PNPLA3Q9NST1 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PNPLA3Q9NST1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PNPLA3Q9NST1 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PNPLA3Q9NST1 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PNPLA3Q9NST1 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.76■□□□□ 0.59
PNPLA3Q9NST1 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PNPLA3Q9NST1 AL162412.1-201ENST00000567129 965 ntBASIC18.76■□□□□ 0.59
PNPLA3Q9NST1 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PNPLA3Q9NST1 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PNPLA3Q9NST1 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PNPLA3Q9NST1 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.76■□□□□ 0.59
PNPLA3Q9NST1 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PNPLA3Q9NST1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PNPLA3Q9NST1 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PNPLA3Q9NST1 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PNPLA3Q9NST1 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.75■□□□□ 0.59
PNPLA3Q9NST1 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.75■□□□□ 0.59
PNPLA3Q9NST1 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
PNPLA3Q9NST1 AC007613.1-201ENST00000572811 2597 ntBASIC18.75■□□□□ 0.59
PNPLA3Q9NST1 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PNPLA3Q9NST1 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.75■□□□□ 0.59
PNPLA3Q9NST1 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.75■□□□□ 0.59
PNPLA3Q9NST1 FAM201B-201ENST00000458407 597 ntBASIC18.75■□□□□ 0.59
PNPLA3Q9NST1 RARRES2P4-201ENST00000514074 484 ntBASIC18.75■□□□□ 0.59
PNPLA3Q9NST1 RNA5SP413-201ENST00000516373 109 ntBASIC18.75■□□□□ 0.59
PNPLA3Q9NST1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PNPLA3Q9NST1 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.75■□□□□ 0.59
PNPLA3Q9NST1 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.75■□□□□ 0.59
PNPLA3Q9NST1 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PNPLA3Q9NST1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.75■□□□□ 0.59
PNPLA3Q9NST1 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PNPLA3Q9NST1 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PNPLA3Q9NST1 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PNPLA3Q9NST1 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PNPLA3Q9NST1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.74■□□□□ 0.59
PNPLA3Q9NST1 AC010980.2-201ENST00000587099 1412 ntBASIC18.74■□□□□ 0.59
PNPLA3Q9NST1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PNPLA3Q9NST1 AL138781.2-201ENST00000617896 1843 ntBASIC18.74■□□□□ 0.59
PNPLA3Q9NST1 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.74■□□□□ 0.59
PNPLA3Q9NST1 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PNPLA3Q9NST1 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.74■□□□□ 0.59
PNPLA3Q9NST1 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.74■□□□□ 0.59
PNPLA3Q9NST1 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PNPLA3Q9NST1 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PNPLA3Q9NST1 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PNPLA3Q9NST1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PNPLA3Q9NST1 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PNPLA3Q9NST1 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.74■□□□□ 0.59
PNPLA3Q9NST1 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.74■□□□□ 0.59
PNPLA3Q9NST1 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.74■□□□□ 0.59
PNPLA3Q9NST1 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.74■□□□□ 0.59
PNPLA3Q9NST1 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.74■□□□□ 0.59
PNPLA3Q9NST1 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PNPLA3Q9NST1 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PNPLA3Q9NST1 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PNPLA3Q9NST1 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms