Protein–RNA interactions for Protein: Q9NR80

ARHGEF4, Rho guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF4Q9NR80 AL049637.2-201ENST00000641778 930 ntBASIC20.58■□□□□ 0.89
ARHGEF4Q9NR80 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
ARHGEF4Q9NR80 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.58■□□□□ 0.88
ARHGEF4Q9NR80 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ARHGEF4Q9NR80 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ARHGEF4Q9NR80 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ARHGEF4Q9NR80 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ARHGEF4Q9NR80 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ARHGEF4Q9NR80 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.58■□□□□ 0.88
ARHGEF4Q9NR80 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ARHGEF4Q9NR80 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ARHGEF4Q9NR80 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ARHGEF4Q9NR80 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF4Q9NR80 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
ARHGEF4Q9NR80 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.57■□□□□ 0.88
ARHGEF4Q9NR80 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.57■□□□□ 0.88
ARHGEF4Q9NR80 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF4Q9NR80 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF4Q9NR80 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF4Q9NR80 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.57■□□□□ 0.88
ARHGEF4Q9NR80 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF4Q9NR80 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF4Q9NR80 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.57■□□□□ 0.88
ARHGEF4Q9NR80 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.57■□□□□ 0.88
ARHGEF4Q9NR80 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.57■□□□□ 0.88
ARHGEF4Q9NR80 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.57■□□□□ 0.88
ARHGEF4Q9NR80 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.57■□□□□ 0.88
ARHGEF4Q9NR80 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ARHGEF4Q9NR80 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.57■□□□□ 0.88
ARHGEF4Q9NR80 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF4Q9NR80 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.57■□□□□ 0.88
ARHGEF4Q9NR80 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF4Q9NR80 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF4Q9NR80 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
ARHGEF4Q9NR80 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
ARHGEF4Q9NR80 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.57■□□□□ 0.88
ARHGEF4Q9NR80 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.57■□□□□ 0.88
ARHGEF4Q9NR80 KRT17P2-201ENST00000300992 1314 ntBASIC20.56■□□□□ 0.88
ARHGEF4Q9NR80 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
ARHGEF4Q9NR80 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARHGEF4Q9NR80 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ARHGEF4Q9NR80 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ARHGEF4Q9NR80 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
ARHGEF4Q9NR80 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.56■□□□□ 0.88
ARHGEF4Q9NR80 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ARHGEF4Q9NR80 AL121829.2-201ENST00000620908 328 ntBASIC20.56■□□□□ 0.88
ARHGEF4Q9NR80 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.56■□□□□ 0.88
ARHGEF4Q9NR80 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARHGEF4Q9NR80 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.56■□□□□ 0.88
ARHGEF4Q9NR80 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.56■□□□□ 0.88
ARHGEF4Q9NR80 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARHGEF4Q9NR80 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ARHGEF4Q9NR80 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGEF4Q9NR80 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGEF4Q9NR80 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGEF4Q9NR80 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGEF4Q9NR80 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGEF4Q9NR80 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGEF4Q9NR80 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGEF4Q9NR80 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGEF4Q9NR80 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGEF4Q9NR80 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
ARHGEF4Q9NR80 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ARHGEF4Q9NR80 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGEF4Q9NR80 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.55■□□□□ 0.88
ARHGEF4Q9NR80 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.55■□□□□ 0.88
ARHGEF4Q9NR80 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.55■□□□□ 0.88
ARHGEF4Q9NR80 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGEF4Q9NR80 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.55■□□□□ 0.88
ARHGEF4Q9NR80 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.55■□□□□ 0.88
ARHGEF4Q9NR80 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGEF4Q9NR80 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.55■□□□□ 0.88
ARHGEF4Q9NR80 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.55■□□□□ 0.88
ARHGEF4Q9NR80 RARRES2P10-201ENST00000564312 460 ntBASIC20.55■□□□□ 0.88
ARHGEF4Q9NR80 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.55■□□□□ 0.88
ARHGEF4Q9NR80 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGEF4Q9NR80 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGEF4Q9NR80 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.55■□□□□ 0.88
ARHGEF4Q9NR80 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGEF4Q9NR80 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGEF4Q9NR80 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ARHGEF4Q9NR80 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.55■□□□□ 0.88
ARHGEF4Q9NR80 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGEF4Q9NR80 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGEF4Q9NR80 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.54■□□□□ 0.88
ARHGEF4Q9NR80 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ARHGEF4Q9NR80 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ARHGEF4Q9NR80 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ARHGEF4Q9NR80 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.54■□□□□ 0.88
ARHGEF4Q9NR80 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.54■□□□□ 0.88
ARHGEF4Q9NR80 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ARHGEF4Q9NR80 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.54■□□□□ 0.88
ARHGEF4Q9NR80 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ARHGEF4Q9NR80 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ARHGEF4Q9NR80 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ARHGEF4Q9NR80 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.54■□□□□ 0.88
ARHGEF4Q9NR80 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
ARHGEF4Q9NR80 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.54■□□□□ 0.88
ARHGEF4Q9NR80 REXO1L12P-201ENST00000622156 912 ntBASIC20.54■□□□□ 0.88
ARHGEF4Q9NR80 AC124283.5-201ENST00000624661 1809 ntBASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms