Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM62Q9BVG3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
TRIM62Q9BVG3 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIM62Q9BVG3 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM62Q9BVG3 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM62Q9BVG3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM62Q9BVG3 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
TRIM62Q9BVG3 RARRES2P10-201ENST00000564312 460 ntBASIC20.48■□□□□ 0.87
TRIM62Q9BVG3 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIM62Q9BVG3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM62Q9BVG3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM62Q9BVG3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
TRIM62Q9BVG3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM62Q9BVG3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM62Q9BVG3 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM62Q9BVG3 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM62Q9BVG3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIM62Q9BVG3 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
TRIM62Q9BVG3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM62Q9BVG3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.47■□□□□ 0.87
TRIM62Q9BVG3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM62Q9BVG3 KRT8P8-201ENST00000434750 1448 ntBASIC20.47■□□□□ 0.87
TRIM62Q9BVG3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM62Q9BVG3 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TRIM62Q9BVG3 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
TRIM62Q9BVG3 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM62Q9BVG3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.47■□□□□ 0.87
TRIM62Q9BVG3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.47■□□□□ 0.87
TRIM62Q9BVG3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.47■□□□□ 0.87
TRIM62Q9BVG3 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.47■□□□□ 0.87
TRIM62Q9BVG3 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
TRIM62Q9BVG3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM62Q9BVG3 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TRIM62Q9BVG3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM62Q9BVG3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM62Q9BVG3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM62Q9BVG3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM62Q9BVG3 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM62Q9BVG3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM62Q9BVG3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM62Q9BVG3 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM62Q9BVG3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
TRIM62Q9BVG3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM62Q9BVG3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
TRIM62Q9BVG3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM62Q9BVG3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM62Q9BVG3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM62Q9BVG3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
TRIM62Q9BVG3 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
TRIM62Q9BVG3 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM62Q9BVG3 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM62Q9BVG3 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.46■□□□□ 0.87
TRIM62Q9BVG3 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.46■□□□□ 0.87
TRIM62Q9BVG3 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM62Q9BVG3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
TRIM62Q9BVG3 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM62Q9BVG3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.46■□□□□ 0.87
TRIM62Q9BVG3 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM62Q9BVG3 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM62Q9BVG3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.46■□□□□ 0.87
TRIM62Q9BVG3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
TRIM62Q9BVG3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM62Q9BVG3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM62Q9BVG3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM62Q9BVG3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM62Q9BVG3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM62Q9BVG3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.46■□□□□ 0.87
TRIM62Q9BVG3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TRIM62Q9BVG3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
TRIM62Q9BVG3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM62Q9BVG3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM62Q9BVG3 AC112907.3-201ENST00000577781 2400 ntBASIC20.45■□□□□ 0.86
TRIM62Q9BVG3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM62Q9BVG3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM62Q9BVG3 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
TRIM62Q9BVG3 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
TRIM62Q9BVG3 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.45■□□□□ 0.86
TRIM62Q9BVG3 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.45■□□□□ 0.86
TRIM62Q9BVG3 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM62Q9BVG3 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM62Q9BVG3 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.45■□□□□ 0.86
TRIM62Q9BVG3 C1QL1P1-201ENST00000568105 661 ntBASIC20.45■□□□□ 0.86
TRIM62Q9BVG3 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.45■□□□□ 0.86
TRIM62Q9BVG3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.45■□□□□ 0.86
TRIM62Q9BVG3 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
TRIM62Q9BVG3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TRIM62Q9BVG3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM62Q9BVG3 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM62Q9BVG3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.45■□□□□ 0.86
TRIM62Q9BVG3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM62Q9BVG3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM62Q9BVG3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.45■□□□□ 0.86
TRIM62Q9BVG3 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
TRIM62Q9BVG3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM62Q9BVG3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.44■□□□□ 0.86
TRIM62Q9BVG3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
TRIM62Q9BVG3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM62Q9BVG3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM62Q9BVG3 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM62Q9BVG3 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms