Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SMOQ99835 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SMOQ99835 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMOQ99835 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMOQ99835 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SMOQ99835 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMOQ99835 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.65■□□□□ 0.9
SMOQ99835 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SMOQ99835 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SMOQ99835 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SMOQ99835 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
SMOQ99835 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.64■□□□□ 0.89
SMOQ99835 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SMOQ99835 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMOQ99835 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
SMOQ99835 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.64■□□□□ 0.89
SMOQ99835 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.64■□□□□ 0.89
SMOQ99835 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.64■□□□□ 0.89
SMOQ99835 AP001412.1-201ENST00000608405 714 ntBASIC20.64■□□□□ 0.89
SMOQ99835 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SMOQ99835 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SMOQ99835 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMOQ99835 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SMOQ99835 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SMOQ99835 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.64■□□□□ 0.89
SMOQ99835 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMOQ99835 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMOQ99835 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMOQ99835 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMOQ99835 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.63■□□□□ 0.89
SMOQ99835 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SMOQ99835 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMOQ99835 NIFKP9-201ENST00000419265 221 ntBASIC20.63■□□□□ 0.89
SMOQ99835 AP002982.1-201ENST00000492365 877 ntBASIC20.63■□□□□ 0.89
SMOQ99835 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.63■□□□□ 0.89
SMOQ99835 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.63■□□□□ 0.89
SMOQ99835 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.63■□□□□ 0.89
SMOQ99835 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SMOQ99835 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.63■□□□□ 0.89
SMOQ99835 AC073195.1-201ENST00000607241 877 ntBASIC20.63■□□□□ 0.89
SMOQ99835 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMOQ99835 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMOQ99835 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SMOQ99835 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMOQ99835 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.62■□□□□ 0.89
SMOQ99835 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMOQ99835 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMOQ99835 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.62■□□□□ 0.89
SMOQ99835 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.62■□□□□ 0.89
SMOQ99835 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.62■□□□□ 0.89
SMOQ99835 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMOQ99835 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMOQ99835 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
SMOQ99835 FAM197Y1-201ENST00000421178 764 ntBASIC20.62■□□□□ 0.89
SMOQ99835 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
SMOQ99835 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.62■□□□□ 0.89
SMOQ99835 CD177P1-201ENST00000606252 935 ntBASIC20.62■□□□□ 0.89
SMOQ99835 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMOQ99835 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMOQ99835 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMOQ99835 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SMOQ99835 KRT8P8-201ENST00000434750 1448 ntBASIC20.61■□□□□ 0.89
SMOQ99835 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.61■□□□□ 0.89
SMOQ99835 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMOQ99835 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMOQ99835 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.61■□□□□ 0.89
SMOQ99835 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SMOQ99835 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.61■□□□□ 0.89
SMOQ99835 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
SMOQ99835 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMOQ99835 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SMOQ99835 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
SMOQ99835 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.61■□□□□ 0.89
SMOQ99835 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SMOQ99835 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SMOQ99835 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.61■□□□□ 0.89
SMOQ99835 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.61■□□□□ 0.89
SMOQ99835 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SMOQ99835 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.61■□□□□ 0.89
SMOQ99835 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMOQ99835 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SMOQ99835 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMOQ99835 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.61■□□□□ 0.89
SMOQ99835 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMOQ99835 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.61■□□□□ 0.89
SMOQ99835 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMOQ99835 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.6■□□□□ 0.89
SMOQ99835 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMOQ99835 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMOQ99835 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.6■□□□□ 0.89
SMOQ99835 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMOQ99835 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMOQ99835 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMOQ99835 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SMOQ99835 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.6■□□□□ 0.89
SMOQ99835 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.6■□□□□ 0.89
SMOQ99835 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.6■□□□□ 0.89
SMOQ99835 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.6■□□□□ 0.89
SMOQ99835 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.6■□□□□ 0.89
SMOQ99835 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms