Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPNE1Q99829 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CPNE1Q99829 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.61■□□□□ 0.73
CPNE1Q99829 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE1Q99829 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE1Q99829 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE1Q99829 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE1Q99829 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE1Q99829 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE1Q99829 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.61■□□□□ 0.73
CPNE1Q99829 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE1Q99829 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.61■□□□□ 0.73
CPNE1Q99829 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.61■□□□□ 0.73
CPNE1Q99829 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.61■□□□□ 0.73
CPNE1Q99829 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CPNE1Q99829 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE1Q99829 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.61■□□□□ 0.73
CPNE1Q99829 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.61■□□□□ 0.73
CPNE1Q99829 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE1Q99829 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE1Q99829 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE1Q99829 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.61■□□□□ 0.73
CPNE1Q99829 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE1Q99829 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CPNE1Q99829 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE1Q99829 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE1Q99829 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE1Q99829 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE1Q99829 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CPNE1Q99829 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE1Q99829 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE1Q99829 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE1Q99829 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.6■□□□□ 0.73
CPNE1Q99829 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE1Q99829 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.6■□□□□ 0.73
CPNE1Q99829 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.6■□□□□ 0.73
CPNE1Q99829 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE1Q99829 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
CPNE1Q99829 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CPNE1Q99829 AC004408.2-201ENST00000623613 2777 ntBASIC19.6■□□□□ 0.73
CPNE1Q99829 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CPNE1Q99829 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE1Q99829 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.6■□□□□ 0.73
CPNE1Q99829 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.6■□□□□ 0.73
CPNE1Q99829 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE1Q99829 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE1Q99829 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.6■□□□□ 0.73
CPNE1Q99829 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE1Q99829 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.6■□□□□ 0.73
CPNE1Q99829 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.6■□□□□ 0.73
CPNE1Q99829 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE1Q99829 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CPNE1Q99829 LINC01465-201ENST00000408887 1940 ntBASIC19.6■□□□□ 0.73
CPNE1Q99829 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CPNE1Q99829 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE1Q99829 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE1Q99829 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.6■□□□□ 0.73
CPNE1Q99829 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CPNE1Q99829 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE1Q99829 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE1Q99829 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE1Q99829 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE1Q99829 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.59■□□□□ 0.73
CPNE1Q99829 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE1Q99829 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.59■□□□□ 0.73
CPNE1Q99829 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.59■□□□□ 0.73
CPNE1Q99829 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE1Q99829 MKRN4P-201ENST00000444706 1521 ntBASIC19.59■□□□□ 0.73
CPNE1Q99829 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE1Q99829 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE1Q99829 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.59■□□□□ 0.73
CPNE1Q99829 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE1Q99829 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.59■□□□□ 0.73
CPNE1Q99829 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CPNE1Q99829 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE1Q99829 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.59■□□□□ 0.73
CPNE1Q99829 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CPNE1Q99829 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CPNE1Q99829 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CPNE1Q99829 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.58■□□□□ 0.73
CPNE1Q99829 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CPNE1Q99829 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CPNE1Q99829 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.58■□□□□ 0.73
CPNE1Q99829 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.73
CPNE1Q99829 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CPNE1Q99829 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.58■□□□□ 0.73
CPNE1Q99829 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CPNE1Q99829 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CPNE1Q99829 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CPNE1Q99829 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.58■□□□□ 0.72
CPNE1Q99829 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CPNE1Q99829 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.58■□□□□ 0.72
CPNE1Q99829 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CPNE1Q99829 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CPNE1Q99829 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CPNE1Q99829 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CPNE1Q99829 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CPNE1Q99829 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CPNE1Q99829 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CPNE1Q99829 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms