Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC28.3■■■□□ 2.12
SCAF11Q99590 AC008040.2-201ENST00000461049 708 ntBASIC28.3■■■□□ 2.12
SCAF11Q99590 AL359075.1-203ENST00000462729 1002 ntBASIC28.3■■■□□ 2.12
SCAF11Q99590 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC28.3■■■□□ 2.12
SCAF11Q99590 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC28.3■■■□□ 2.12
SCAF11Q99590 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC28.3■■■□□ 2.12
SCAF11Q99590 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC28.3■■■□□ 2.12
SCAF11Q99590 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
SCAF11Q99590 AC069148.1-201ENST00000608741 768 ntBASIC28.3■■■□□ 2.12
SCAF11Q99590 AC011558.1-201ENST00000623459 338 ntBASIC28.3■■■□□ 2.12
SCAF11Q99590 CLN6-214ENST00000636314 442 ntTSL 3 BASIC28.3■■■□□ 2.12
SCAF11Q99590 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC28.3■■■□□ 2.12
SCAF11Q99590 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC28.3■■■□□ 2.12
SCAF11Q99590 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC28.3■■■□□ 2.12
SCAF11Q99590 AC092338.2-201ENST00000568827 1415 ntBASIC28.3■■■□□ 2.12
SCAF11Q99590 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC28.3■■■□□ 2.12
SCAF11Q99590 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC28.3■■■□□ 2.12
SCAF11Q99590 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC28.3■■■□□ 2.12
SCAF11Q99590 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC28.29■■■□□ 2.12
SCAF11Q99590 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
SCAF11Q99590 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC28.29■■■□□ 2.12
SCAF11Q99590 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC28.29■■■□□ 2.12
SCAF11Q99590 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SCAF11Q99590 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC28.29■■■□□ 2.12
SCAF11Q99590 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC28.29■■■□□ 2.12
SCAF11Q99590 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC28.29■■■□□ 2.12
SCAF11Q99590 AC008622.2-201ENST00000617006 1229 ntBASIC28.29■■■□□ 2.12
SCAF11Q99590 AC130371.2-201ENST00000619443 611 ntBASIC28.29■■■□□ 2.12
SCAF11Q99590 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SCAF11Q99590 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC28.29■■■□□ 2.12
SCAF11Q99590 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SCAF11Q99590 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SCAF11Q99590 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SCAF11Q99590 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
SCAF11Q99590 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
SCAF11Q99590 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC28.28■■■□□ 2.12
SCAF11Q99590 AC116351.2-201ENST00000606540 1585 ntBASIC28.28■■■□□ 2.12
SCAF11Q99590 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC28.28■■■□□ 2.12
SCAF11Q99590 HOMER2P1-201ENST00000455653 964 ntBASIC28.28■■■□□ 2.12
SCAF11Q99590 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC28.28■■■□□ 2.12
SCAF11Q99590 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC28.28■■■□□ 2.12
SCAF11Q99590 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC28.28■■■□□ 2.12
SCAF11Q99590 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC28.28■■■□□ 2.12
SCAF11Q99590 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SCAF11Q99590 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SCAF11Q99590 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC28.28■■■□□ 2.12
SCAF11Q99590 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC28.28■■■□□ 2.12
SCAF11Q99590 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC28.28■■■□□ 2.12
SCAF11Q99590 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SCAF11Q99590 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
SCAF11Q99590 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC28.27■■■□□ 2.12
SCAF11Q99590 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC28.27■■■□□ 2.12
SCAF11Q99590 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
SCAF11Q99590 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC28.27■■■□□ 2.12
SCAF11Q99590 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
SCAF11Q99590 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC28.27■■■□□ 2.12
SCAF11Q99590 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC28.27■■■□□ 2.12
SCAF11Q99590 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
SCAF11Q99590 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC28.27■■■□□ 2.12
SCAF11Q99590 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SCAF11Q99590 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SCAF11Q99590 CD81-212ENST00000526072 1172 ntTSL 5 BASIC28.27■■■□□ 2.12
SCAF11Q99590 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC28.27■■■□□ 2.12
SCAF11Q99590 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC28.27■■■□□ 2.12
SCAF11Q99590 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SCAF11Q99590 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
SCAF11Q99590 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC28.26■■■□□ 2.11
SCAF11Q99590 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.11
SCAF11Q99590 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
SCAF11Q99590 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC28.26■■■□□ 2.11
SCAF11Q99590 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
SCAF11Q99590 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
SCAF11Q99590 AC004951.3-201ENST00000418645 1148 ntBASIC28.26■■■□□ 2.11
SCAF11Q99590 PTPA-216ENST00000432651 857 ntTSL 2 BASIC28.26■■■□□ 2.11
SCAF11Q99590 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC28.26■■■□□ 2.11
SCAF11Q99590 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
SCAF11Q99590 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC28.26■■■□□ 2.11
SCAF11Q99590 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
SCAF11Q99590 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC28.25■■■□□ 2.11
SCAF11Q99590 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC28.25■■■□□ 2.11
SCAF11Q99590 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
SCAF11Q99590 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC28.25■■■□□ 2.11
SCAF11Q99590 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
SCAF11Q99590 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
SCAF11Q99590 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC28.25■■■□□ 2.11
SCAF11Q99590 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
SCAF11Q99590 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
SCAF11Q99590 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
SCAF11Q99590 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
SCAF11Q99590 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
SCAF11Q99590 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC28.24■■■□□ 2.11
SCAF11Q99590 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC28.24■■■□□ 2.11
SCAF11Q99590 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC28.24■■■□□ 2.11
SCAF11Q99590 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC28.24■■■□□ 2.11
SCAF11Q99590 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC28.24■■■□□ 2.11
SCAF11Q99590 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC28.24■■■□□ 2.11
SCAF11Q99590 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC28.24■■■□□ 2.11
SCAF11Q99590 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC28.24■■■□□ 2.11
SCAF11Q99590 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC28.24■■■□□ 2.11
SCAF11Q99590 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms