Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.62■□□□□ 0.89
SHKBP1Q8TBC3 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.62■□□□□ 0.89
SHKBP1Q8TBC3 AL390955.1-201ENST00000428694 934 ntBASIC20.62■□□□□ 0.89
SHKBP1Q8TBC3 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.62■□□□□ 0.89
SHKBP1Q8TBC3 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.62■□□□□ 0.89
SHKBP1Q8TBC3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.62■□□□□ 0.89
SHKBP1Q8TBC3 RN7SL850P-201ENST00000579959 291 ntBASIC20.62■□□□□ 0.89
SHKBP1Q8TBC3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SHKBP1Q8TBC3 AC145285.6-201ENST00000604632 637 ntBASIC20.62■□□□□ 0.89
SHKBP1Q8TBC3 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.62■□□□□ 0.89
SHKBP1Q8TBC3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHKBP1Q8TBC3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHKBP1Q8TBC3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.62■□□□□ 0.89
SHKBP1Q8TBC3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.62■□□□□ 0.89
SHKBP1Q8TBC3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHKBP1Q8TBC3 AC018553.1-201ENST00000616682 1458 ntBASIC20.62■□□□□ 0.89
SHKBP1Q8TBC3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SHKBP1Q8TBC3 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.61■□□□□ 0.89
SHKBP1Q8TBC3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHKBP1Q8TBC3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHKBP1Q8TBC3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHKBP1Q8TBC3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
SHKBP1Q8TBC3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.61■□□□□ 0.89
SHKBP1Q8TBC3 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHKBP1Q8TBC3 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.61■□□□□ 0.89
SHKBP1Q8TBC3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.61■□□□□ 0.89
SHKBP1Q8TBC3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SHKBP1Q8TBC3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.61■□□□□ 0.89
SHKBP1Q8TBC3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHKBP1Q8TBC3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHKBP1Q8TBC3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHKBP1Q8TBC3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.6■□□□□ 0.89
SHKBP1Q8TBC3 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SHKBP1Q8TBC3 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.6■□□□□ 0.89
SHKBP1Q8TBC3 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SHKBP1Q8TBC3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
SHKBP1Q8TBC3 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.6■□□□□ 0.89
SHKBP1Q8TBC3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SHKBP1Q8TBC3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.6■□□□□ 0.89
SHKBP1Q8TBC3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SHKBP1Q8TBC3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.6■□□□□ 0.89
SHKBP1Q8TBC3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHKBP1Q8TBC3 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHKBP1Q8TBC3 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHKBP1Q8TBC3 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHKBP1Q8TBC3 TMPOP1-202ENST00000424642 1267 ntBASIC20.6■□□□□ 0.89
SHKBP1Q8TBC3 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.6■□□□□ 0.89
SHKBP1Q8TBC3 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.6■□□□□ 0.89
SHKBP1Q8TBC3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHKBP1Q8TBC3 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SHKBP1Q8TBC3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHKBP1Q8TBC3 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.6■□□□□ 0.89
SHKBP1Q8TBC3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHKBP1Q8TBC3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SHKBP1Q8TBC3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.6■□□□□ 0.89
SHKBP1Q8TBC3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHKBP1Q8TBC3 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SHKBP1Q8TBC3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SHKBP1Q8TBC3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
SHKBP1Q8TBC3 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
SHKBP1Q8TBC3 FEM1AP1-201ENST00000431297 1995 ntBASIC20.59■□□□□ 0.89
SHKBP1Q8TBC3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.59■□□□□ 0.89
SHKBP1Q8TBC3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHKBP1Q8TBC3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHKBP1Q8TBC3 CYP2D8P-201ENST00000433633 1490 ntBASIC20.59■□□□□ 0.89
SHKBP1Q8TBC3 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
SHKBP1Q8TBC3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.59■□□□□ 0.89
SHKBP1Q8TBC3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.59■□□□□ 0.89
SHKBP1Q8TBC3 FITM1-202ENST00000559294 800 ntBASIC20.59■□□□□ 0.89
SHKBP1Q8TBC3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.59■□□□□ 0.89
SHKBP1Q8TBC3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHKBP1Q8TBC3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.59■□□□□ 0.89
SHKBP1Q8TBC3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.59■□□□□ 0.89
SHKBP1Q8TBC3 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHKBP1Q8TBC3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
SHKBP1Q8TBC3 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
SHKBP1Q8TBC3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SHKBP1Q8TBC3 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.58■□□□□ 0.89
SHKBP1Q8TBC3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SHKBP1Q8TBC3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.58■□□□□ 0.89
SHKBP1Q8TBC3 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.58■□□□□ 0.89
SHKBP1Q8TBC3 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
SHKBP1Q8TBC3 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SHKBP1Q8TBC3 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.58■□□□□ 0.89
SHKBP1Q8TBC3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.58■□□□□ 0.89
SHKBP1Q8TBC3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.58■□□□□ 0.89
SHKBP1Q8TBC3 YBX1P10-201ENST00000444752 975 ntBASIC20.58■□□□□ 0.89
SHKBP1Q8TBC3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.58■□□□□ 0.89
SHKBP1Q8TBC3 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.58■□□□□ 0.89
SHKBP1Q8TBC3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SHKBP1Q8TBC3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.58■□□□□ 0.89
SHKBP1Q8TBC3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.58■□□□□ 0.88
SHKBP1Q8TBC3 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
SHKBP1Q8TBC3 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SHKBP1Q8TBC3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SHKBP1Q8TBC3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SHKBP1Q8TBC3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SHKBP1Q8TBC3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
SHKBP1Q8TBC3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.58■□□□□ 0.88
SHKBP1Q8TBC3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms