Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NUP43Q8NFH3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
NUP43Q8NFH3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
NUP43Q8NFH3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
NUP43Q8NFH3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.37■□□□□ 0.53
NUP43Q8NFH3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
NUP43Q8NFH3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
NUP43Q8NFH3 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.37■□□□□ 0.53
NUP43Q8NFH3 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
NUP43Q8NFH3 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.37■□□□□ 0.53
NUP43Q8NFH3 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.37■□□□□ 0.53
NUP43Q8NFH3 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.37■□□□□ 0.53
NUP43Q8NFH3 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.37■□□□□ 0.53
NUP43Q8NFH3 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.37■□□□□ 0.53
NUP43Q8NFH3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
NUP43Q8NFH3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NUP43Q8NFH3 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.37■□□□□ 0.53
NUP43Q8NFH3 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NUP43Q8NFH3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NUP43Q8NFH3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
NUP43Q8NFH3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NUP43Q8NFH3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NUP43Q8NFH3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NUP43Q8NFH3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.37■□□□□ 0.53
NUP43Q8NFH3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.36■□□□□ 0.53
NUP43Q8NFH3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NUP43Q8NFH3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.36■□□□□ 0.53
NUP43Q8NFH3 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NUP43Q8NFH3 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NUP43Q8NFH3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NUP43Q8NFH3 ID1-201ENST00000376105 1233 ntBASIC18.36■□□□□ 0.53
NUP43Q8NFH3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NUP43Q8NFH3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
NUP43Q8NFH3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NUP43Q8NFH3 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.36■□□□□ 0.53
NUP43Q8NFH3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.36■□□□□ 0.53
NUP43Q8NFH3 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.36■□□□□ 0.53
NUP43Q8NFH3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.36■□□□□ 0.53
NUP43Q8NFH3 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.36■□□□□ 0.53
NUP43Q8NFH3 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.36■□□□□ 0.53
NUP43Q8NFH3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NUP43Q8NFH3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.36■□□□□ 0.53
NUP43Q8NFH3 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NUP43Q8NFH3 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NUP43Q8NFH3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.36■□□□□ 0.53
NUP43Q8NFH3 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NUP43Q8NFH3 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NUP43Q8NFH3 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.36■□□□□ 0.53
NUP43Q8NFH3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
NUP43Q8NFH3 SOX15-203ENST00000570788 1093 ntBASIC18.36■□□□□ 0.53
NUP43Q8NFH3 AC007952.6-201ENST00000573168 2673 ntBASIC18.36■□□□□ 0.53
NUP43Q8NFH3 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.36■□□□□ 0.53
NUP43Q8NFH3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.36■□□□□ 0.53
NUP43Q8NFH3 AC003957.1-201ENST00000625108 2673 ntBASIC18.36■□□□□ 0.53
NUP43Q8NFH3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
NUP43Q8NFH3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NUP43Q8NFH3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NUP43Q8NFH3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NUP43Q8NFH3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
NUP43Q8NFH3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.35■□□□□ 0.53
NUP43Q8NFH3 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.35■□□□□ 0.53
NUP43Q8NFH3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NUP43Q8NFH3 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NUP43Q8NFH3 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
NUP43Q8NFH3 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NUP43Q8NFH3 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NUP43Q8NFH3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.35■□□□□ 0.53
NUP43Q8NFH3 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NUP43Q8NFH3 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.35■□□□□ 0.53
NUP43Q8NFH3 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
NUP43Q8NFH3 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.35■□□□□ 0.53
NUP43Q8NFH3 AC120498.8-201ENST00000614275 531 ntBASIC18.35■□□□□ 0.53
NUP43Q8NFH3 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.35■□□□□ 0.53
NUP43Q8NFH3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NUP43Q8NFH3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NUP43Q8NFH3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NUP43Q8NFH3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.35■□□□□ 0.53
NUP43Q8NFH3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
NUP43Q8NFH3 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NUP43Q8NFH3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
NUP43Q8NFH3 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NUP43Q8NFH3 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NUP43Q8NFH3 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
NUP43Q8NFH3 AC093484.2-201ENST00000580996 2166 ntBASIC18.34■□□□□ 0.53
NUP43Q8NFH3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NUP43Q8NFH3 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.34■□□□□ 0.53
NUP43Q8NFH3 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.34■□□□□ 0.53
NUP43Q8NFH3 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
NUP43Q8NFH3 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NUP43Q8NFH3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
NUP43Q8NFH3 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NUP43Q8NFH3 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NUP43Q8NFH3 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.34■□□□□ 0.53
NUP43Q8NFH3 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.34■□□□□ 0.53
NUP43Q8NFH3 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.34■□□□□ 0.53
NUP43Q8NFH3 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NUP43Q8NFH3 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.34■□□□□ 0.53
NUP43Q8NFH3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
NUP43Q8NFH3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NUP43Q8NFH3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms