Protein–RNA interactions for Protein: Q8N9I9

DTX3, Probable E3 ubiquitin-protein ligase DTX3, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX3Q8N9I9 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DTX3Q8N9I9 AC011270.2-201ENST00000624293 2550 ntBASIC17.29■□□□□ 0.36
DTX3Q8N9I9 AL133373.2-201ENST00000623187 2828 ntBASIC17.29■□□□□ 0.36
DTX3Q8N9I9 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DTX3Q8N9I9 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.29■□□□□ 0.36
DTX3Q8N9I9 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DTX3Q8N9I9 CCDC92B-201ENST00000575506 885 ntBASIC17.29■□□□□ 0.36
DTX3Q8N9I9 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.29■□□□□ 0.36
DTX3Q8N9I9 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.29■□□□□ 0.36
DTX3Q8N9I9 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DTX3Q8N9I9 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DTX3Q8N9I9 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DTX3Q8N9I9 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
DTX3Q8N9I9 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
DTX3Q8N9I9 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
DTX3Q8N9I9 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.29■□□□□ 0.36
DTX3Q8N9I9 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DTX3Q8N9I9 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DTX3Q8N9I9 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DTX3Q8N9I9 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
DTX3Q8N9I9 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DTX3Q8N9I9 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.28■□□□□ 0.36
DTX3Q8N9I9 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DTX3Q8N9I9 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DTX3Q8N9I9 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DTX3Q8N9I9 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DTX3Q8N9I9 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DTX3Q8N9I9 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DTX3Q8N9I9 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DTX3Q8N9I9 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.28■□□□□ 0.36
DTX3Q8N9I9 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DTX3Q8N9I9 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
DTX3Q8N9I9 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DTX3Q8N9I9 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.28■□□□□ 0.36
DTX3Q8N9I9 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.28■□□□□ 0.36
DTX3Q8N9I9 KRT18P5-201ENST00000436075 1291 ntBASIC17.28■□□□□ 0.36
DTX3Q8N9I9 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.28■□□□□ 0.36
DTX3Q8N9I9 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.28■□□□□ 0.36
DTX3Q8N9I9 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
DTX3Q8N9I9 MIR6084-201ENST00000622012 110 ntBASIC17.28■□□□□ 0.36
DTX3Q8N9I9 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DTX3Q8N9I9 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DTX3Q8N9I9 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
DTX3Q8N9I9 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
DTX3Q8N9I9 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.28■□□□□ 0.36
DTX3Q8N9I9 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
DTX3Q8N9I9 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
DTX3Q8N9I9 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DTX3Q8N9I9 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
DTX3Q8N9I9 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.28■□□□□ 0.36
DTX3Q8N9I9 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
DTX3Q8N9I9 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
DTX3Q8N9I9 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.28■□□□□ 0.36
DTX3Q8N9I9 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DTX3Q8N9I9 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DTX3Q8N9I9 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DTX3Q8N9I9 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.28■□□□□ 0.36
DTX3Q8N9I9 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
DTX3Q8N9I9 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
DTX3Q8N9I9 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
DTX3Q8N9I9 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.27■□□□□ 0.36
DTX3Q8N9I9 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
DTX3Q8N9I9 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
DTX3Q8N9I9 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
DTX3Q8N9I9 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
DTX3Q8N9I9 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
DTX3Q8N9I9 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
DTX3Q8N9I9 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
DTX3Q8N9I9 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
DTX3Q8N9I9 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
DTX3Q8N9I9 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
DTX3Q8N9I9 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
DTX3Q8N9I9 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.27■□□□□ 0.36
DTX3Q8N9I9 NTF6G-201ENST00000591094 616 ntBASIC17.27■□□□□ 0.36
DTX3Q8N9I9 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.27■□□□□ 0.36
DTX3Q8N9I9 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
DTX3Q8N9I9 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.27■□□□□ 0.36
DTX3Q8N9I9 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
DTX3Q8N9I9 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
DTX3Q8N9I9 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
DTX3Q8N9I9 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
DTX3Q8N9I9 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
DTX3Q8N9I9 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.27■□□□□ 0.35
DTX3Q8N9I9 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
DTX3Q8N9I9 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
DTX3Q8N9I9 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
DTX3Q8N9I9 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DTX3Q8N9I9 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.26■□□□□ 0.35
DTX3Q8N9I9 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.26■□□□□ 0.35
DTX3Q8N9I9 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DTX3Q8N9I9 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DTX3Q8N9I9 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DTX3Q8N9I9 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
DTX3Q8N9I9 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DTX3Q8N9I9 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DTX3Q8N9I9 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DTX3Q8N9I9 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.26■□□□□ 0.35
DTX3Q8N9I9 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.26■□□□□ 0.35
DTX3Q8N9I9 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DTX3Q8N9I9 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms