Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC50Q8IVM0 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC50Q8IVM0 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC50Q8IVM0 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC50Q8IVM0 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC50Q8IVM0 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
CCDC50Q8IVM0 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC50Q8IVM0 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CCDC50Q8IVM0 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC50Q8IVM0 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC50Q8IVM0 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC50Q8IVM0 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC50Q8IVM0 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC50Q8IVM0 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
CCDC50Q8IVM0 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC50Q8IVM0 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.68■□□□□ 0.9
CCDC50Q8IVM0 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC50Q8IVM0 C2orf69P4-201ENST00000565394 541 ntBASIC20.68■□□□□ 0.9
CCDC50Q8IVM0 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC50Q8IVM0 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC50Q8IVM0 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC50Q8IVM0 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC50Q8IVM0 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC50Q8IVM0 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC50Q8IVM0 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC50Q8IVM0 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC50Q8IVM0 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC50Q8IVM0 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC50Q8IVM0 AC093484.2-201ENST00000580996 2166 ntBASIC20.68■□□□□ 0.9
CCDC50Q8IVM0 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC50Q8IVM0 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC50Q8IVM0 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC50Q8IVM0 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CCDC50Q8IVM0 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC50Q8IVM0 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC50Q8IVM0 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC50Q8IVM0 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC50Q8IVM0 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC50Q8IVM0 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC50Q8IVM0 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC50Q8IVM0 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.67■□□□□ 0.9
CCDC50Q8IVM0 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.67■□□□□ 0.9
CCDC50Q8IVM0 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.67■□□□□ 0.9
CCDC50Q8IVM0 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC50Q8IVM0 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CCDC50Q8IVM0 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC50Q8IVM0 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC50Q8IVM0 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC50Q8IVM0 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC50Q8IVM0 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC50Q8IVM0 AP001271.2-201ENST00000624018 1556 ntBASIC20.67■□□□□ 0.9
CCDC50Q8IVM0 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.67■□□□□ 0.9
CCDC50Q8IVM0 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC50Q8IVM0 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC50Q8IVM0 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC50Q8IVM0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC50Q8IVM0 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC50Q8IVM0 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC50Q8IVM0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC50Q8IVM0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
CCDC50Q8IVM0 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC50Q8IVM0 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CCDC50Q8IVM0 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC50Q8IVM0 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC50Q8IVM0 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC50Q8IVM0 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC50Q8IVM0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC50Q8IVM0 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC50Q8IVM0 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC50Q8IVM0 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC50Q8IVM0 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC50Q8IVM0 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC50Q8IVM0 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC50Q8IVM0 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC50Q8IVM0 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC50Q8IVM0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC50Q8IVM0 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC50Q8IVM0 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC50Q8IVM0 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC50Q8IVM0 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC50Q8IVM0 LSM12P1-201ENST00000411836 588 ntBASIC20.65■□□□□ 0.9
CCDC50Q8IVM0 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC50Q8IVM0 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC50Q8IVM0 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC50Q8IVM0 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CCDC50Q8IVM0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CCDC50Q8IVM0 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC50Q8IVM0 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC50Q8IVM0 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC50Q8IVM0 PHGDH-210ENST00000641115 1638 ntBASIC20.64■□□□□ 0.9
CCDC50Q8IVM0 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
CCDC50Q8IVM0 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC50Q8IVM0 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC50Q8IVM0 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC50Q8IVM0 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC50Q8IVM0 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC50Q8IVM0 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC50Q8IVM0 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC50Q8IVM0 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CCDC50Q8IVM0 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms