Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.49■□□□□ 0.55
LPCAT4Q643R3 AC139713.2-201ENST00000641328 2723 ntBASIC18.49■□□□□ 0.55
LPCAT4Q643R3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.49■□□□□ 0.55
LPCAT4Q643R3 POU5F1P4-201ENST00000413175 1085 ntBASIC18.49■□□□□ 0.55
LPCAT4Q643R3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.49■□□□□ 0.55
LPCAT4Q643R3 AC008175.2-201ENST00000612840 297 ntBASIC18.49■□□□□ 0.55
LPCAT4Q643R3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LPCAT4Q643R3 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LPCAT4Q643R3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LPCAT4Q643R3 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LPCAT4Q643R3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LPCAT4Q643R3 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LPCAT4Q643R3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LPCAT4Q643R3 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.49■□□□□ 0.55
LPCAT4Q643R3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
LPCAT4Q643R3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.49■□□□□ 0.55
LPCAT4Q643R3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LPCAT4Q643R3 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LPCAT4Q643R3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LPCAT4Q643R3 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LPCAT4Q643R3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LPCAT4Q643R3 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
LPCAT4Q643R3 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LPCAT4Q643R3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
LPCAT4Q643R3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LPCAT4Q643R3 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.48■□□□□ 0.55
LPCAT4Q643R3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LPCAT4Q643R3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LPCAT4Q643R3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LPCAT4Q643R3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LPCAT4Q643R3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
LPCAT4Q643R3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.48■□□□□ 0.55
LPCAT4Q643R3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.48■□□□□ 0.55
LPCAT4Q643R3 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.48■□□□□ 0.55
LPCAT4Q643R3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.48■□□□□ 0.55
LPCAT4Q643R3 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.48■□□□□ 0.55
LPCAT4Q643R3 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.48■□□□□ 0.55
LPCAT4Q643R3 AL512631.2-201ENST00000604634 923 ntBASIC18.48■□□□□ 0.55
LPCAT4Q643R3 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.48■□□□□ 0.55
LPCAT4Q643R3 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
LPCAT4Q643R3 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
LPCAT4Q643R3 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LPCAT4Q643R3 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LPCAT4Q643R3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
LPCAT4Q643R3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.48■□□□□ 0.55
LPCAT4Q643R3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
LPCAT4Q643R3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
LPCAT4Q643R3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
LPCAT4Q643R3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LPCAT4Q643R3 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.47■□□□□ 0.55
LPCAT4Q643R3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.47■□□□□ 0.55
LPCAT4Q643R3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.47■□□□□ 0.55
LPCAT4Q643R3 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.47■□□□□ 0.55
LPCAT4Q643R3 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LPCAT4Q643R3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LPCAT4Q643R3 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LPCAT4Q643R3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LPCAT4Q643R3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
LPCAT4Q643R3 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.47■□□□□ 0.55
LPCAT4Q643R3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LPCAT4Q643R3 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LPCAT4Q643R3 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LPCAT4Q643R3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LPCAT4Q643R3 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LPCAT4Q643R3 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LPCAT4Q643R3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.47■□□□□ 0.55
LPCAT4Q643R3 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
LPCAT4Q643R3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
LPCAT4Q643R3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LPCAT4Q643R3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
LPCAT4Q643R3 AL035685.1-201ENST00000636663 812 ntBASIC18.47■□□□□ 0.55
LPCAT4Q643R3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.47■□□□□ 0.55
LPCAT4Q643R3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
LPCAT4Q643R3 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LPCAT4Q643R3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LPCAT4Q643R3 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.47■□□□□ 0.55
LPCAT4Q643R3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LPCAT4Q643R3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LPCAT4Q643R3 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LPCAT4Q643R3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LPCAT4Q643R3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LPCAT4Q643R3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.46■□□□□ 0.55
LPCAT4Q643R3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LPCAT4Q643R3 AL031598.1-201ENST00000561511 1773 ntBASIC18.46■□□□□ 0.55
LPCAT4Q643R3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.46■□□□□ 0.55
LPCAT4Q643R3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.46■□□□□ 0.55
LPCAT4Q643R3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.46■□□□□ 0.55
LPCAT4Q643R3 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
LPCAT4Q643R3 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
LPCAT4Q643R3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.46■□□□□ 0.55
LPCAT4Q643R3 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.46■□□□□ 0.55
LPCAT4Q643R3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LPCAT4Q643R3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LPCAT4Q643R3 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LPCAT4Q643R3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LPCAT4Q643R3 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
LPCAT4Q643R3 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
LPCAT4Q643R3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.46■□□□□ 0.54
LPCAT4Q643R3 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
LPCAT4Q643R3 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms