Protein–RNA interactions for Protein: Q5VWM3

PRAMEF18, PRAME family member 18, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF18Q5VWM3 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC23.2■■□□□ 1.3
PRAMEF18Q5VWM3 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
PRAMEF18Q5VWM3 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
PRAMEF18Q5VWM3 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PRAMEF18Q5VWM3 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
PRAMEF18Q5VWM3 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PRAMEF18Q5VWM3 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
PRAMEF18Q5VWM3 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PRAMEF18Q5VWM3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC23.19■■□□□ 1.3
PRAMEF18Q5VWM3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC23.19■■□□□ 1.3
PRAMEF18Q5VWM3 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PRAMEF18Q5VWM3 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PRAMEF18Q5VWM3 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PRAMEF18Q5VWM3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PRAMEF18Q5VWM3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PRAMEF18Q5VWM3 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PRAMEF18Q5VWM3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRAMEF18Q5VWM3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PRAMEF18Q5VWM3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC23.18■■□□□ 1.3
PRAMEF18Q5VWM3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRAMEF18Q5VWM3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRAMEF18Q5VWM3 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRAMEF18Q5VWM3 ANKRD20A18P-201ENST00000359341 492 ntBASIC23.18■■□□□ 1.3
PRAMEF18Q5VWM3 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC23.18■■□□□ 1.3
PRAMEF18Q5VWM3 Z85996.1-201ENST00000494644 937 ntBASIC23.18■■□□□ 1.3
PRAMEF18Q5VWM3 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC23.18■■□□□ 1.3
PRAMEF18Q5VWM3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC23.18■■□□□ 1.3
PRAMEF18Q5VWM3 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC23.18■■□□□ 1.3
PRAMEF18Q5VWM3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC23.18■■□□□ 1.3
PRAMEF18Q5VWM3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRAMEF18Q5VWM3 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC23.18■■□□□ 1.3
PRAMEF18Q5VWM3 PHGDH-210ENST00000641115 1638 ntBASIC23.18■■□□□ 1.3
PRAMEF18Q5VWM3 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRAMEF18Q5VWM3 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC23.17■■□□□ 1.3
PRAMEF18Q5VWM3 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRAMEF18Q5VWM3 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRAMEF18Q5VWM3 WWC2-AS2-201ENST00000578387 2183 ntBASIC23.17■■□□□ 1.3
PRAMEF18Q5VWM3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRAMEF18Q5VWM3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRAMEF18Q5VWM3 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC23.17■■□□□ 1.3
PRAMEF18Q5VWM3 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRAMEF18Q5VWM3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
PRAMEF18Q5VWM3 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRAMEF18Q5VWM3 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PRAMEF18Q5VWM3 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
PRAMEF18Q5VWM3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRAMEF18Q5VWM3 KRT18P38-201ENST00000449496 1282 ntBASIC23.17■■□□□ 1.3
PRAMEF18Q5VWM3 AL671277.2-201ENST00000458060 996 ntBASIC23.17■■□□□ 1.3
PRAMEF18Q5VWM3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC23.17■■□□□ 1.3
PRAMEF18Q5VWM3 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC23.17■■□□□ 1.3
PRAMEF18Q5VWM3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC23.17■■□□□ 1.3
PRAMEF18Q5VWM3 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRAMEF18Q5VWM3 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC23.17■■□□□ 1.3
PRAMEF18Q5VWM3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC23.17■■□□□ 1.3
PRAMEF18Q5VWM3 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRAMEF18Q5VWM3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRAMEF18Q5VWM3 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRAMEF18Q5VWM3 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRAMEF18Q5VWM3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC23.17■■□□□ 1.3
PRAMEF18Q5VWM3 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRAMEF18Q5VWM3 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC23.16■■□□□ 1.3
PRAMEF18Q5VWM3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC23.16■■□□□ 1.3
PRAMEF18Q5VWM3 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
PRAMEF18Q5VWM3 AC005332.1-201ENST00000577698 1310 ntBASIC23.16■■□□□ 1.3
PRAMEF18Q5VWM3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PRAMEF18Q5VWM3 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC23.16■■□□□ 1.3
PRAMEF18Q5VWM3 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC23.16■■□□□ 1.3
PRAMEF18Q5VWM3 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC23.16■■□□□ 1.3
PRAMEF18Q5VWM3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
PRAMEF18Q5VWM3 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC23.16■■□□□ 1.3
PRAMEF18Q5VWM3 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PRAMEF18Q5VWM3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC23.16■■□□□ 1.3
PRAMEF18Q5VWM3 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
PRAMEF18Q5VWM3 AL117328.2-201ENST00000624617 1940 ntBASIC23.16■■□□□ 1.3
PRAMEF18Q5VWM3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC23.15■■□□□ 1.3
PRAMEF18Q5VWM3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC23.15■■□□□ 1.3
PRAMEF18Q5VWM3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PRAMEF18Q5VWM3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PRAMEF18Q5VWM3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC23.15■■□□□ 1.3
PRAMEF18Q5VWM3 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PRAMEF18Q5VWM3 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PRAMEF18Q5VWM3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PRAMEF18Q5VWM3 AL450487.1-201ENST00000426799 995 ntBASIC23.15■■□□□ 1.3
PRAMEF18Q5VWM3 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC23.15■■□□□ 1.3
PRAMEF18Q5VWM3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PRAMEF18Q5VWM3 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC23.15■■□□□ 1.3
PRAMEF18Q5VWM3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PRAMEF18Q5VWM3 AC140113.3-201ENST00000605663 199 ntBASIC23.15■■□□□ 1.3
PRAMEF18Q5VWM3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
PRAMEF18Q5VWM3 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC23.15■■□□□ 1.3
PRAMEF18Q5VWM3 VPS72-207ENST00000640458 689 ntTSL 5 BASIC23.15■■□□□ 1.3
PRAMEF18Q5VWM3 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PRAMEF18Q5VWM3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
PRAMEF18Q5VWM3 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PRAMEF18Q5VWM3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
PRAMEF18Q5VWM3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PRAMEF18Q5VWM3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PRAMEF18Q5VWM3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
PRAMEF18Q5VWM3 LINC01465-201ENST00000408887 1940 ntBASIC23.14■■□□□ 1.3
PRAMEF18Q5VWM3 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms