Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RFX7Q2KHR2 FDX2-207ENST00000494368 584 ntTSL 4 BASIC23.83■■□□□ 1.41
RFX7Q2KHR2 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
RFX7Q2KHR2 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC23.83■■□□□ 1.41
RFX7Q2KHR2 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC23.83■■□□□ 1.41
RFX7Q2KHR2 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC23.83■■□□□ 1.41
RFX7Q2KHR2 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC23.83■■□□□ 1.41
RFX7Q2KHR2 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
RFX7Q2KHR2 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC23.83■■□□□ 1.41
RFX7Q2KHR2 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC23.83■■□□□ 1.41
RFX7Q2KHR2 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
RFX7Q2KHR2 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RFX7Q2KHR2 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC23.83■■□□□ 1.4
RFX7Q2KHR2 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC23.83■■□□□ 1.4
RFX7Q2KHR2 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
RFX7Q2KHR2 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
RFX7Q2KHR2 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
RFX7Q2KHR2 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
RFX7Q2KHR2 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC23.82■■□□□ 1.4
RFX7Q2KHR2 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RFX7Q2KHR2 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC23.82■■□□□ 1.4
RFX7Q2KHR2 PNN-205ENST00000556530 601 ntTSL 2 BASIC23.82■■□□□ 1.4
RFX7Q2KHR2 RPS15-203ENST00000586096 570 ntTSL 2 BASIC23.82■■□□□ 1.4
RFX7Q2KHR2 LINC01023-201ENST00000606054 436 ntBASIC23.82■■□□□ 1.4
RFX7Q2KHR2 AC026471.5-201ENST00000615068 467 ntBASIC23.82■■□□□ 1.4
RFX7Q2KHR2 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RFX7Q2KHR2 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RFX7Q2KHR2 AC125437.2-201ENST00000625180 2167 ntBASIC23.82■■□□□ 1.4
RFX7Q2KHR2 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
RFX7Q2KHR2 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RFX7Q2KHR2 MED17-221ENST00000639724 2317 ntTSL 5 BASIC23.82■■□□□ 1.4
RFX7Q2KHR2 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC23.82■■□□□ 1.4
RFX7Q2KHR2 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RFX7Q2KHR2 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RFX7Q2KHR2 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC23.81■■□□□ 1.4
RFX7Q2KHR2 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
RFX7Q2KHR2 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RFX7Q2KHR2 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
RFX7Q2KHR2 BID-204ENST00000399767 2129 ntTSL 2 BASIC23.81■■□□□ 1.4
RFX7Q2KHR2 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
RFX7Q2KHR2 REXO1L12P-201ENST00000622156 912 ntBASIC23.81■■□□□ 1.4
RFX7Q2KHR2 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC23.81■■□□□ 1.4
RFX7Q2KHR2 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC23.81■■□□□ 1.4
RFX7Q2KHR2 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
RFX7Q2KHR2 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RFX7Q2KHR2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RFX7Q2KHR2 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
RFX7Q2KHR2 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC23.81■■□□□ 1.4
RFX7Q2KHR2 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
RFX7Q2KHR2 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC23.81■■□□□ 1.4
RFX7Q2KHR2 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RFX7Q2KHR2 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
RFX7Q2KHR2 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RFX7Q2KHR2 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RFX7Q2KHR2 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RFX7Q2KHR2 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RFX7Q2KHR2 AL353807.1-201ENST00000427475 662 ntBASIC23.8■■□□□ 1.4
RFX7Q2KHR2 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC23.8■■□□□ 1.4
RFX7Q2KHR2 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC23.8■■□□□ 1.4
RFX7Q2KHR2 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RFX7Q2KHR2 AL353708.3-201ENST00000610272 989 ntBASIC23.8■■□□□ 1.4
RFX7Q2KHR2 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RFX7Q2KHR2 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
RFX7Q2KHR2 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RFX7Q2KHR2 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RFX7Q2KHR2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RFX7Q2KHR2 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
RFX7Q2KHR2 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RFX7Q2KHR2 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RFX7Q2KHR2 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RFX7Q2KHR2 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
RFX7Q2KHR2 YBX1P10-201ENST00000444752 975 ntBASIC23.79■■□□□ 1.4
RFX7Q2KHR2 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC23.79■■□□□ 1.4
RFX7Q2KHR2 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC23.79■■□□□ 1.4
RFX7Q2KHR2 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC23.79■■□□□ 1.4
RFX7Q2KHR2 AC097493.4-201ENST00000641197 219 ntBASIC23.79■■□□□ 1.4
RFX7Q2KHR2 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
RFX7Q2KHR2 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
RFX7Q2KHR2 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RFX7Q2KHR2 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
RFX7Q2KHR2 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
RFX7Q2KHR2 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RFX7Q2KHR2 SRI-203ENST00000419179 1307 ntTSL 2 BASIC23.79■■□□□ 1.4
RFX7Q2KHR2 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
RFX7Q2KHR2 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RFX7Q2KHR2 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RFX7Q2KHR2 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC23.78■■□□□ 1.4
RFX7Q2KHR2 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RFX7Q2KHR2 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RFX7Q2KHR2 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
RFX7Q2KHR2 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
RFX7Q2KHR2 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC23.78■■□□□ 1.4
RFX7Q2KHR2 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC23.78■■□□□ 1.4
RFX7Q2KHR2 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RFX7Q2KHR2 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RFX7Q2KHR2 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
RFX7Q2KHR2 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RFX7Q2KHR2 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
RFX7Q2KHR2 TREX1-205ENST00000625293 1783 ntBASIC23.78■■□□□ 1.4
RFX7Q2KHR2 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms