Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.34■□□□□ 0.53
RPS3AP61247 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RPS3AP61247 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.34■□□□□ 0.53
RPS3AP61247 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RPS3AP61247 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPS3AP61247 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RPS3AP61247 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RPS3AP61247 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
RPS3AP61247 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RPS3AP61247 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPS3AP61247 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPS3AP61247 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RPS3AP61247 AC125437.2-201ENST00000625180 2167 ntBASIC18.34■□□□□ 0.53
RPS3AP61247 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
RPS3AP61247 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPS3AP61247 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RPS3AP61247 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPS3AP61247 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.33■□□□□ 0.53
RPS3AP61247 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
RPS3AP61247 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPS3AP61247 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.33■□□□□ 0.53
RPS3AP61247 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RPS3AP61247 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RPS3AP61247 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPS3AP61247 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPS3AP61247 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPS3AP61247 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.33■□□□□ 0.53
RPS3AP61247 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.33■□□□□ 0.53
RPS3AP61247 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPS3AP61247 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.33■□□□□ 0.53
RPS3AP61247 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPS3AP61247 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RPS3AP61247 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPS3AP61247 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
RPS3AP61247 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.33■□□□□ 0.52
RPS3AP61247 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.33■□□□□ 0.52
RPS3AP61247 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.33■□□□□ 0.52
RPS3AP61247 KRT18P6-201ENST00000555540 1265 ntBASIC18.33■□□□□ 0.52
RPS3AP61247 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.33■□□□□ 0.52
RPS3AP61247 AC098934.4-201ENST00000564127 592 ntBASIC18.33■□□□□ 0.52
RPS3AP61247 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPS3AP61247 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
RPS3AP61247 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
RPS3AP61247 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
RPS3AP61247 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RPS3AP61247 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPS3AP61247 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
RPS3AP61247 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.33■□□□□ 0.52
RPS3AP61247 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPS3AP61247 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPS3AP61247 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPS3AP61247 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPS3AP61247 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RPS3AP61247 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.32■□□□□ 0.52
RPS3AP61247 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RPS3AP61247 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.32■□□□□ 0.52
RPS3AP61247 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.32■□□□□ 0.52
RPS3AP61247 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.32■□□□□ 0.52
RPS3AP61247 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RPS3AP61247 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RPS3AP61247 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.32■□□□□ 0.52
RPS3AP61247 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.32■□□□□ 0.52
RPS3AP61247 AL356652.1-201ENST00000615962 565 ntBASIC18.32■□□□□ 0.52
RPS3AP61247 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.32■□□□□ 0.52
RPS3AP61247 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RPS3AP61247 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPS3AP61247 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPS3AP61247 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPS3AP61247 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPS3AP61247 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPS3AP61247 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RPS3AP61247 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RPS3AP61247 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPS3AP61247 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RPS3AP61247 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RPS3AP61247 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPS3AP61247 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPS3AP61247 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RPS3AP61247 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPS3AP61247 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RPS3AP61247 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPS3AP61247 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPS3AP61247 AL032819.2-201ENST00000624543 2162 ntBASIC18.31■□□□□ 0.52
RPS3AP61247 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RPS3AP61247 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
RPS3AP61247 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.31■□□□□ 0.52
RPS3AP61247 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPS3AP61247 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPS3AP61247 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RPS3AP61247 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RPS3AP61247 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.31■□□□□ 0.52
RPS3AP61247 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.31■□□□□ 0.52
RPS3AP61247 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.31■□□□□ 0.52
RPS3AP61247 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPS3AP61247 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.31■□□□□ 0.52
RPS3AP61247 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
RPS3AP61247 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.31■□□□□ 0.52
RPS3AP61247 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RPS3AP61247 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
RPS3AP61247 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms