Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VSX2P58304 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VSX2P58304 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.8■□□□□ 0.6
VSX2P58304 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VSX2P58304 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VSX2P58304 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
VSX2P58304 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
VSX2P58304 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
VSX2P58304 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.79■□□□□ 0.6
VSX2P58304 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VSX2P58304 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.79■□□□□ 0.6
VSX2P58304 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
VSX2P58304 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
VSX2P58304 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
VSX2P58304 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VSX2P58304 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.79■□□□□ 0.6
VSX2P58304 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
VSX2P58304 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VSX2P58304 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VSX2P58304 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.79■□□□□ 0.6
VSX2P58304 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VSX2P58304 KRT16P5-201ENST00000455284 522 ntBASIC18.79■□□□□ 0.6
VSX2P58304 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.79■□□□□ 0.6
VSX2P58304 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VSX2P58304 RPS2P4-201ENST00000476944 856 ntBASIC18.79■□□□□ 0.6
VSX2P58304 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VSX2P58304 AP001271.2-201ENST00000624018 1556 ntBASIC18.79■□□□□ 0.6
VSX2P58304 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.79■□□□□ 0.6
VSX2P58304 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
VSX2P58304 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VSX2P58304 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
VSX2P58304 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VSX2P58304 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.78■□□□□ 0.6
VSX2P58304 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.78■□□□□ 0.6
VSX2P58304 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
VSX2P58304 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VSX2P58304 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VSX2P58304 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
VSX2P58304 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
VSX2P58304 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.78■□□□□ 0.6
VSX2P58304 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VSX2P58304 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VSX2P58304 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
VSX2P58304 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
VSX2P58304 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VSX2P58304 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
VSX2P58304 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
VSX2P58304 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.78■□□□□ 0.6
VSX2P58304 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VSX2P58304 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.78■□□□□ 0.6
VSX2P58304 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VSX2P58304 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VSX2P58304 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
VSX2P58304 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.78■□□□□ 0.6
VSX2P58304 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
VSX2P58304 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
VSX2P58304 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
VSX2P58304 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.78■□□□□ 0.6
VSX2P58304 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VSX2P58304 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
VSX2P58304 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VSX2P58304 MIR718-201ENST00000390190 70 ntBASIC18.77■□□□□ 0.6
VSX2P58304 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VSX2P58304 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
VSX2P58304 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.77■□□□□ 0.6
VSX2P58304 Z99916.2-201ENST00000604037 246 ntBASIC18.77■□□□□ 0.6
VSX2P58304 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.77■□□□□ 0.6
VSX2P58304 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
VSX2P58304 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
VSX2P58304 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VSX2P58304 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VSX2P58304 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
VSX2P58304 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
VSX2P58304 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.77■□□□□ 0.59
VSX2P58304 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.77■□□□□ 0.59
VSX2P58304 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
VSX2P58304 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VSX2P58304 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.76■□□□□ 0.59
VSX2P58304 TCF3P1-201ENST00000423021 1937 ntBASIC18.76■□□□□ 0.59
VSX2P58304 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VSX2P58304 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VSX2P58304 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
VSX2P58304 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
VSX2P58304 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VSX2P58304 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
VSX2P58304 YBX1P10-201ENST00000444752 975 ntBASIC18.76■□□□□ 0.59
VSX2P58304 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.76■□□□□ 0.59
VSX2P58304 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.76■□□□□ 0.59
VSX2P58304 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.76■□□□□ 0.59
VSX2P58304 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.76■□□□□ 0.59
VSX2P58304 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VSX2P58304 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VSX2P58304 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VSX2P58304 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
VSX2P58304 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VSX2P58304 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VSX2P58304 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VSX2P58304 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VSX2P58304 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.75■□□□□ 0.59
VSX2P58304 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms