Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CDH6P55285 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.42■□□□□ 0.86
CDH6P55285 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.42■□□□□ 0.86
CDH6P55285 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.42■□□□□ 0.86
CDH6P55285 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.42■□□□□ 0.86
CDH6P55285 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.42■□□□□ 0.86
CDH6P55285 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
CDH6P55285 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH6P55285 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CDH6P55285 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH6P55285 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.42■□□□□ 0.86
CDH6P55285 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
CDH6P55285 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDH6P55285 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.42■□□□□ 0.86
CDH6P55285 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH6P55285 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH6P55285 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH6P55285 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.41■□□□□ 0.86
CDH6P55285 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH6P55285 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.41■□□□□ 0.86
CDH6P55285 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH6P55285 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.41■□□□□ 0.86
CDH6P55285 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH6P55285 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDH6P55285 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.41■□□□□ 0.86
CDH6P55285 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.41■□□□□ 0.86
CDH6P55285 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.41■□□□□ 0.86
CDH6P55285 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.41■□□□□ 0.86
CDH6P55285 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.41■□□□□ 0.86
CDH6P55285 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.41■□□□□ 0.86
CDH6P55285 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.41■□□□□ 0.86
CDH6P55285 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDH6P55285 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH6P55285 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH6P55285 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
CDH6P55285 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDH6P55285 AC093484.2-201ENST00000580996 2166 ntBASIC20.41■□□□□ 0.86
CDH6P55285 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDH6P55285 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH6P55285 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH6P55285 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH6P55285 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDH6P55285 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH6P55285 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDH6P55285 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDH6P55285 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.4■□□□□ 0.86
CDH6P55285 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.4■□□□□ 0.86
CDH6P55285 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH6P55285 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.4■□□□□ 0.86
CDH6P55285 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.4■□□□□ 0.86
CDH6P55285 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH6P55285 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.4■□□□□ 0.86
CDH6P55285 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CDH6P55285 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.4■□□□□ 0.86
CDH6P55285 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.4■□□□□ 0.86
CDH6P55285 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.4■□□□□ 0.86
CDH6P55285 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.4■□□□□ 0.86
CDH6P55285 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.4■□□□□ 0.86
CDH6P55285 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
CDH6P55285 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CDH6P55285 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.39■□□□□ 0.86
CDH6P55285 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDH6P55285 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CDH6P55285 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDH6P55285 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDH6P55285 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDH6P55285 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDH6P55285 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDH6P55285 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDH6P55285 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CDH6P55285 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDH6P55285 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.39■□□□□ 0.85
CDH6P55285 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDH6P55285 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDH6P55285 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.39■□□□□ 0.85
CDH6P55285 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDH6P55285 SOX15-203ENST00000570788 1093 ntBASIC20.39■□□□□ 0.85
CDH6P55285 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.39■□□□□ 0.85
CDH6P55285 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.39■□□□□ 0.85
CDH6P55285 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDH6P55285 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CDH6P55285 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDH6P55285 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDH6P55285 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.39■□□□□ 0.85
CDH6P55285 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDH6P55285 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH6P55285 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDH6P55285 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.38■□□□□ 0.85
CDH6P55285 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CDH6P55285 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH6P55285 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH6P55285 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDH6P55285 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH6P55285 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.38■□□□□ 0.85
CDH6P55285 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH6P55285 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDH6P55285 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CDH6P55285 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.38■□□□□ 0.85
CDH6P55285 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH6P55285 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms