Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HLCSP50747 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HLCSP50747 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HLCSP50747 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.73■□□□□ 0.59
HLCSP50747 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HLCSP50747 PNMA6B-201ENST00000538162 1200 ntBASIC18.73■□□□□ 0.59
HLCSP50747 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.73■□□□□ 0.59
HLCSP50747 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.73■□□□□ 0.59
HLCSP50747 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HLCSP50747 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HLCSP50747 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HLCSP50747 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HLCSP50747 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
HLCSP50747 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.73■□□□□ 0.59
HLCSP50747 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HLCSP50747 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HLCSP50747 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HLCSP50747 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HLCSP50747 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HLCSP50747 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HLCSP50747 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
HLCSP50747 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HLCSP50747 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.72■□□□□ 0.59
HLCSP50747 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.72■□□□□ 0.59
HLCSP50747 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
HLCSP50747 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HLCSP50747 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
HLCSP50747 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HLCSP50747 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HLCSP50747 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.72■□□□□ 0.59
HLCSP50747 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.72■□□□□ 0.59
HLCSP50747 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HLCSP50747 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HLCSP50747 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.72■□□□□ 0.59
HLCSP50747 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.72■□□□□ 0.59
HLCSP50747 AC006058.3-201ENST00000606217 1069 ntBASIC18.72■□□□□ 0.59
HLCSP50747 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
HLCSP50747 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HLCSP50747 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HLCSP50747 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.72■□□□□ 0.59
HLCSP50747 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
HLCSP50747 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HLCSP50747 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HLCSP50747 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
HLCSP50747 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.72■□□□□ 0.59
HLCSP50747 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HLCSP50747 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HLCSP50747 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HLCSP50747 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLCSP50747 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.71■□□□□ 0.59
HLCSP50747 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
HLCSP50747 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.71■□□□□ 0.59
HLCSP50747 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLCSP50747 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.71■□□□□ 0.59
HLCSP50747 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HLCSP50747 AC092720.2-201ENST00000602388 1665 ntBASIC18.71■□□□□ 0.59
HLCSP50747 PRORSD1P-201ENST00000295112 541 ntBASIC18.71■□□□□ 0.59
HLCSP50747 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
HLCSP50747 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
HLCSP50747 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLCSP50747 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HLCSP50747 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLCSP50747 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.71■□□□□ 0.59
HLCSP50747 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.71■□□□□ 0.59
HLCSP50747 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.71■□□□□ 0.59
HLCSP50747 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.71■□□□□ 0.59
HLCSP50747 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLCSP50747 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLCSP50747 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HLCSP50747 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLCSP50747 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HLCSP50747 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HLCSP50747 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLCSP50747 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLCSP50747 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLCSP50747 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLCSP50747 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLCSP50747 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLCSP50747 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HLCSP50747 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLCSP50747 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.7■□□□□ 0.58
HLCSP50747 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
HLCSP50747 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HLCSP50747 AC093503.3-201ENST00000624917 2352 ntBASIC18.7■□□□□ 0.58
HLCSP50747 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
HLCSP50747 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.7■□□□□ 0.58
HLCSP50747 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HLCSP50747 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLCSP50747 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.7■□□□□ 0.58
HLCSP50747 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLCSP50747 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
HLCSP50747 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLCSP50747 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLCSP50747 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLCSP50747 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.7■□□□□ 0.58
HLCSP50747 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
HLCSP50747 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.7■□□□□ 0.58
HLCSP50747 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.7■□□□□ 0.58
HLCSP50747 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLCSP50747 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms