Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC1A1P43005 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
SLC1A1P43005 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC1A1P43005 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
SLC1A1P43005 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC1A1P43005 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.54■□□□□ 0.88
SLC1A1P43005 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC1A1P43005 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SLC1A1P43005 AC083906.2-201ENST00000511578 360 ntBASIC20.54■□□□□ 0.88
SLC1A1P43005 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.54■□□□□ 0.88
SLC1A1P43005 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.54■□□□□ 0.88
SLC1A1P43005 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.54■□□□□ 0.88
SLC1A1P43005 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.54■□□□□ 0.88
SLC1A1P43005 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.54■□□□□ 0.88
SLC1A1P43005 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.54■□□□□ 0.88
SLC1A1P43005 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SLC1A1P43005 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.54■□□□□ 0.88
SLC1A1P43005 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SLC1A1P43005 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC1A1P43005 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC1A1P43005 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC1A1P43005 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.53■□□□□ 0.88
SLC1A1P43005 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
SLC1A1P43005 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC1A1P43005 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.53■□□□□ 0.88
SLC1A1P43005 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SLC1A1P43005 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC1A1P43005 DUSP5P2-201ENST00000426873 1033 ntBASIC20.53■□□□□ 0.88
SLC1A1P43005 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
SLC1A1P43005 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.53■□□□□ 0.88
SLC1A1P43005 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SLC1A1P43005 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
SLC1A1P43005 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SLC1A1P43005 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.53■□□□□ 0.88
SLC1A1P43005 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC1A1P43005 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC1A1P43005 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC1A1P43005 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.53■□□□□ 0.88
SLC1A1P43005 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC1A1P43005 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
SLC1A1P43005 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC1A1P43005 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC1A1P43005 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC1A1P43005 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SLC1A1P43005 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SLC1A1P43005 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SLC1A1P43005 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC1A1P43005 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SLC1A1P43005 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SLC1A1P43005 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.52■□□□□ 0.88
SLC1A1P43005 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.52■□□□□ 0.88
SLC1A1P43005 AC006970.2-201ENST00000450065 779 ntBASIC20.52■□□□□ 0.88
SLC1A1P43005 AC091874.3-201ENST00000512672 1195 ntBASIC20.52■□□□□ 0.88
SLC1A1P43005 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.52■□□□□ 0.88
SLC1A1P43005 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.52■□□□□ 0.88
SLC1A1P43005 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC1A1P43005 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC1A1P43005 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SLC1A1P43005 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SLC1A1P43005 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
SLC1A1P43005 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC1A1P43005 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC1A1P43005 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
SLC1A1P43005 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC1A1P43005 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.52■□□□□ 0.88
SLC1A1P43005 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SLC1A1P43005 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.52■□□□□ 0.87
SLC1A1P43005 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SLC1A1P43005 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.52■□□□□ 0.87
SLC1A1P43005 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC1A1P43005 TNXA-203ENST00000507684 2038 ntBASIC20.51■□□□□ 0.87
SLC1A1P43005 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
SLC1A1P43005 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC1A1P43005 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SLC1A1P43005 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
SLC1A1P43005 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC1A1P43005 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC1A1P43005 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SLC1A1P43005 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC1A1P43005 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.51■□□□□ 0.87
SLC1A1P43005 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC1A1P43005 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SLC1A1P43005 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC1A1P43005 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.51■□□□□ 0.87
SLC1A1P43005 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SLC1A1P43005 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.51■□□□□ 0.87
SLC1A1P43005 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.51■□□□□ 0.87
SLC1A1P43005 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.51■□□□□ 0.87
SLC1A1P43005 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.51■□□□□ 0.87
SLC1A1P43005 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.51■□□□□ 0.87
SLC1A1P43005 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC1A1P43005 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC1A1P43005 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.51■□□□□ 0.87
SLC1A1P43005 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC1A1P43005 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC1A1P43005 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.51■□□□□ 0.87
SLC1A1P43005 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC1A1P43005 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SLC1A1P43005 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC1A1P43005 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms