Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC13.54□□□□□ -0.24
RPL13AP40429 AC093503.3-201ENST00000624917 2352 ntBASIC13.54□□□□□ -0.24
RPL13AP40429 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL13AP40429 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RPL13AP40429 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL13AP40429 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
RPL13AP40429 AC005332.7-201ENST00000614046 2005 ntBASIC13.54□□□□□ -0.24
RPL13AP40429 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
RPL13AP40429 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
RPL13AP40429 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
RPL13AP40429 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL13AP40429 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RPL13AP40429 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC13.54□□□□□ -0.24
RPL13AP40429 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL13AP40429 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
RPL13AP40429 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL13AP40429 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL13AP40429 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC13.54□□□□□ -0.24
RPL13AP40429 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL13AP40429 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
RPL13AP40429 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RPL13AP40429 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC13.54□□□□□ -0.24
RPL13AP40429 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL13AP40429 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL13AP40429 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL13AP40429 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL13AP40429 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC13.54□□□□□ -0.24
RPL13AP40429 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL13AP40429 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL13AP40429 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC13.54□□□□□ -0.24
RPL13AP40429 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RPL13AP40429 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL13AP40429 AC125437.2-201ENST00000625180 2167 ntBASIC13.54□□□□□ -0.24
RPL13AP40429 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL13AP40429 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC13.54□□□□□ -0.24
RPL13AP40429 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL13AP40429 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
RPL13AP40429 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL13AP40429 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL13AP40429 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
RPL13AP40429 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL13AP40429 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL13AP40429 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL13AP40429 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RPL13AP40429 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC13.53□□□□□ -0.24
RPL13AP40429 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
RPL13AP40429 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL13AP40429 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL13AP40429 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
RPL13AP40429 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RPL13AP40429 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
RPL13AP40429 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
RPL13AP40429 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL13AP40429 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
RPL13AP40429 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL13AP40429 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC13.53□□□□□ -0.24
RPL13AP40429 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC13.53□□□□□ -0.24
RPL13AP40429 NKILA-201ENST00000613231 537 ntTSL 4 BASIC13.53□□□□□ -0.24
RPL13AP40429 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL13AP40429 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL13AP40429 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL13AP40429 AL049812.1-201ENST00000432563 2267 ntBASIC13.53□□□□□ -0.24
RPL13AP40429 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL13AP40429 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL13AP40429 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL13AP40429 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC13.53□□□□□ -0.24
RPL13AP40429 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
RPL13AP40429 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL13AP40429 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC13.53□□□□□ -0.24
RPL13AP40429 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL13AP40429 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL13AP40429 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL13AP40429 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL13AP40429 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RPL13AP40429 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC13.52□□□□□ -0.24
RPL13AP40429 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
RPL13AP40429 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
RPL13AP40429 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RPL13AP40429 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
RPL13AP40429 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RPL13AP40429 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RPL13AP40429 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RPL13AP40429 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RPL13AP40429 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC13.52□□□□□ -0.25
RPL13AP40429 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC13.52□□□□□ -0.25
RPL13AP40429 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RPL13AP40429 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC13.52□□□□□ -0.25
RPL13AP40429 DUX4L19-201ENST00000557448 1267 ntBASIC13.52□□□□□ -0.25
RPL13AP40429 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RPL13AP40429 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RPL13AP40429 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RPL13AP40429 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC13.52□□□□□ -0.25
RPL13AP40429 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
RPL13AP40429 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RPL13AP40429 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RPL13AP40429 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RPL13AP40429 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
RPL13AP40429 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
RPL13AP40429 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC13.52□□□□□ -0.25
RPL13AP40429 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms