Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM17P0DL12 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM17P0DL12 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM17P0DL12 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM17P0DL12 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM17P0DL12 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
SMIM17P0DL12 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SMIM17P0DL12 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM17P0DL12 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM17P0DL12 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
SMIM17P0DL12 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM17P0DL12 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM17P0DL12 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM17P0DL12 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM17P0DL12 TMEM179-206ENST00000616017 1645 ntBASIC14.59□□□□□ -0.07
SMIM17P0DL12 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM17P0DL12 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.59□□□□□ -0.07
SMIM17P0DL12 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM17P0DL12 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC14.59□□□□□ -0.07
SMIM17P0DL12 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM17P0DL12 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM17P0DL12 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM17P0DL12 NME4-202ENST00000382940 766 ntTSL 3 BASIC14.59□□□□□ -0.07
SMIM17P0DL12 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM17P0DL12 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC14.59□□□□□ -0.07
SMIM17P0DL12 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC14.59□□□□□ -0.07
SMIM17P0DL12 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC14.59□□□□□ -0.07
SMIM17P0DL12 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC14.59□□□□□ -0.07
SMIM17P0DL12 NME4-211ENST00000620944 1193 ntTSL 2 BASIC14.59□□□□□ -0.07
SMIM17P0DL12 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC14.59□□□□□ -0.07
SMIM17P0DL12 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM17P0DL12 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM17P0DL12 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
SMIM17P0DL12 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
SMIM17P0DL12 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM17P0DL12 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC14.59□□□□□ -0.07
SMIM17P0DL12 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM17P0DL12 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
SMIM17P0DL12 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM17P0DL12 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
SMIM17P0DL12 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SMIM17P0DL12 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC14.58□□□□□ -0.07
SMIM17P0DL12 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
SMIM17P0DL12 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
SMIM17P0DL12 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.07
SMIM17P0DL12 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
SMIM17P0DL12 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SMIM17P0DL12 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC14.58□□□□□ -0.08
SMIM17P0DL12 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM17P0DL12 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM17P0DL12 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM17P0DL12 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM17P0DL12 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM17P0DL12 H19-201ENST00000411754 1788 ntTSL 5 BASIC14.58□□□□□ -0.08
SMIM17P0DL12 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM17P0DL12 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM17P0DL12 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM17P0DL12 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM17P0DL12 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM17P0DL12 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
SMIM17P0DL12 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM17P0DL12 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC14.58□□□□□ -0.08
SMIM17P0DL12 AF213884.3-201ENST00000563833 479 ntBASIC14.58□□□□□ -0.08
SMIM17P0DL12 TPRG1LP1-201ENST00000598702 760 ntBASIC14.58□□□□□ -0.08
SMIM17P0DL12 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM17P0DL12 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM17P0DL12 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM17P0DL12 AL032819.2-201ENST00000624543 2162 ntBASIC14.58□□□□□ -0.08
SMIM17P0DL12 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM17P0DL12 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC14.58□□□□□ -0.08
SMIM17P0DL12 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
SMIM17P0DL12 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
SMIM17P0DL12 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC14.58□□□□□ -0.08
SMIM17P0DL12 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM17P0DL12 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM17P0DL12 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM17P0DL12 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.58□□□□□ -0.08
SMIM17P0DL12 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC14.58□□□□□ -0.08
SMIM17P0DL12 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM17P0DL12 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM17P0DL12 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
SMIM17P0DL12 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM17P0DL12 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
SMIM17P0DL12 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SMIM17P0DL12 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SMIM17P0DL12 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SMIM17P0DL12 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM17P0DL12 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM17P0DL12 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC14.57□□□□□ -0.08
SMIM17P0DL12 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM17P0DL12 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SMIM17P0DL12 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC14.57□□□□□ -0.08
SMIM17P0DL12 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM17P0DL12 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC14.57□□□□□ -0.08
SMIM17P0DL12 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM17P0DL12 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC14.57□□□□□ -0.08
SMIM17P0DL12 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC14.57□□□□□ -0.08
SMIM17P0DL12 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC14.57□□□□□ -0.08
SMIM17P0DL12 DUX4L2-201ENST00000561772 1275 ntBASIC14.57□□□□□ -0.08
SMIM17P0DL12 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms