Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.5■□□□□ 0.23
CD74P04233 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CD74P04233 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD74P04233 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD74P04233 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD74P04233 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC16.5■□□□□ 0.23
CD74P04233 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD74P04233 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CD74P04233 PBX2P1-201ENST00000493219 1291 ntBASIC16.5■□□□□ 0.23
CD74P04233 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD74P04233 AF213884.3-201ENST00000563833 479 ntBASIC16.5■□□□□ 0.23
CD74P04233 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.5■□□□□ 0.23
CD74P04233 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC16.5■□□□□ 0.23
CD74P04233 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.5■□□□□ 0.23
CD74P04233 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.5■□□□□ 0.23
CD74P04233 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD74P04233 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.5■□□□□ 0.23
CD74P04233 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CD74P04233 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
CD74P04233 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC16.5■□□□□ 0.23
CD74P04233 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD74P04233 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD74P04233 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD74P04233 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD74P04233 AC093525.10-201ENST00000625130 1569 ntBASIC16.5■□□□□ 0.23
CD74P04233 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
CD74P04233 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD74P04233 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CD74P04233 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CD74P04233 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.49■□□□□ 0.23
CD74P04233 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CD74P04233 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.49■□□□□ 0.23
CD74P04233 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CD74P04233 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CD74P04233 AC019069.1-201ENST00000610008 1333 ntBASIC16.49■□□□□ 0.23
CD74P04233 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CD74P04233 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.49■□□□□ 0.23
CD74P04233 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CD74P04233 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.49■□□□□ 0.23
CD74P04233 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.49■□□□□ 0.23
CD74P04233 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.49■□□□□ 0.23
CD74P04233 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.49■□□□□ 0.23
CD74P04233 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
CD74P04233 MIR6084-201ENST00000622012 110 ntBASIC16.49■□□□□ 0.23
CD74P04233 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.49■□□□□ 0.23
CD74P04233 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CD74P04233 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CD74P04233 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CD74P04233 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CD74P04233 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CD74P04233 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CD74P04233 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CD74P04233 PHGDH-210ENST00000641115 1638 ntBASIC16.48■□□□□ 0.23
CD74P04233 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD74P04233 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD74P04233 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD74P04233 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD74P04233 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.48■□□□□ 0.23
CD74P04233 LTB4R2-202ENST00000528054 3092 ntBASIC16.48■□□□□ 0.23
CD74P04233 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD74P04233 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.48■□□□□ 0.23
CD74P04233 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD74P04233 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.48■□□□□ 0.23
CD74P04233 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.48■□□□□ 0.23
CD74P04233 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC16.48■□□□□ 0.23
CD74P04233 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD74P04233 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.48■□□□□ 0.23
CD74P04233 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD74P04233 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CD74P04233 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CD74P04233 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD74P04233 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.48■□□□□ 0.23
CD74P04233 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD74P04233 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD74P04233 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.48■□□□□ 0.23
CD74P04233 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD74P04233 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD74P04233 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.48■□□□□ 0.23
CD74P04233 WIZP1-201ENST00000531444 2299 ntBASIC16.48■□□□□ 0.23
CD74P04233 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.48■□□□□ 0.23
CD74P04233 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CD74P04233 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD74P04233 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD74P04233 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CD74P04233 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD74P04233 TEX21P-204ENST00000641479 1693 ntBASIC16.47■□□□□ 0.23
CD74P04233 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.47■□□□□ 0.23
CD74P04233 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD74P04233 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD74P04233 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC16.47■□□□□ 0.23
CD74P04233 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
CD74P04233 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.47■□□□□ 0.23
CD74P04233 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC16.47■□□□□ 0.23
CD74P04233 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CD74P04233 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC16.47■□□□□ 0.23
CD74P04233 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CD74P04233 AC131212.1-201ENST00000613771 668 ntBASIC16.47■□□□□ 0.23
CD74P04233 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CD74P04233 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD74P04233 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms