Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
APOA1P02647 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
APOA1P02647 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
APOA1P02647 AL691432.2-201ENST00000607222 2038 ntBASIC17.48■□□□□ 0.39
APOA1P02647 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.48■□□□□ 0.39
APOA1P02647 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
APOA1P02647 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.48■□□□□ 0.39
APOA1P02647 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
APOA1P02647 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
APOA1P02647 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.48■□□□□ 0.39
APOA1P02647 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
APOA1P02647 MIR2861-201ENST00000636310 90 ntBASIC17.48■□□□□ 0.39
APOA1P02647 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.48■□□□□ 0.39
APOA1P02647 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
APOA1P02647 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
APOA1P02647 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.48■□□□□ 0.39
APOA1P02647 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.48■□□□□ 0.39
APOA1P02647 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
APOA1P02647 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
APOA1P02647 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
APOA1P02647 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
APOA1P02647 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
APOA1P02647 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.48■□□□□ 0.39
APOA1P02647 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.48■□□□□ 0.39
APOA1P02647 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
APOA1P02647 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
APOA1P02647 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.48■□□□□ 0.39
APOA1P02647 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
APOA1P02647 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
APOA1P02647 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
APOA1P02647 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
APOA1P02647 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.47■□□□□ 0.39
APOA1P02647 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
APOA1P02647 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
APOA1P02647 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
APOA1P02647 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
APOA1P02647 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
APOA1P02647 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.47■□□□□ 0.39
APOA1P02647 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.47■□□□□ 0.39
APOA1P02647 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
APOA1P02647 AC104581.1-202ENST00000635932 2618 ntBASIC17.47■□□□□ 0.39
APOA1P02647 SERBP1P1-201ENST00000396021 1160 ntBASIC17.47■□□□□ 0.39
APOA1P02647 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
APOA1P02647 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
APOA1P02647 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.47■□□□□ 0.39
APOA1P02647 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.47■□□□□ 0.39
APOA1P02647 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.47■□□□□ 0.39
APOA1P02647 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
APOA1P02647 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.47■□□□□ 0.39
APOA1P02647 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.47■□□□□ 0.39
APOA1P02647 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
APOA1P02647 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
APOA1P02647 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.47■□□□□ 0.39
APOA1P02647 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
APOA1P02647 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
APOA1P02647 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
APOA1P02647 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
APOA1P02647 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
APOA1P02647 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
APOA1P02647 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
APOA1P02647 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
APOA1P02647 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
APOA1P02647 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.46■□□□□ 0.39
APOA1P02647 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
APOA1P02647 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
APOA1P02647 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
APOA1P02647 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.46■□□□□ 0.39
APOA1P02647 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.46■□□□□ 0.39
APOA1P02647 AC011298.3-201ENST00000615796 283 ntBASIC17.46■□□□□ 0.39
APOA1P02647 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
APOA1P02647 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.46■□□□□ 0.39
APOA1P02647 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.46■□□□□ 0.39
APOA1P02647 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
APOA1P02647 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
APOA1P02647 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
APOA1P02647 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.46■□□□□ 0.39
APOA1P02647 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
APOA1P02647 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
APOA1P02647 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
APOA1P02647 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
APOA1P02647 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.46■□□□□ 0.39
APOA1P02647 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
APOA1P02647 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
APOA1P02647 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
APOA1P02647 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
APOA1P02647 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.45■□□□□ 0.38
APOA1P02647 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.45■□□□□ 0.38
APOA1P02647 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
APOA1P02647 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
APOA1P02647 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.45■□□□□ 0.38
APOA1P02647 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
APOA1P02647 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
APOA1P02647 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
APOA1P02647 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
APOA1P02647 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
APOA1P02647 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
APOA1P02647 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
APOA1P02647 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.45■□□□□ 0.38
APOA1P02647 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
APOA1P02647 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms