Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19■□□□□ 0.63
KRT6AP02538 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
KRT6AP02538 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19■□□□□ 0.63
KRT6AP02538 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19■□□□□ 0.63
KRT6AP02538 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19■□□□□ 0.63
KRT6AP02538 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19■□□□□ 0.63
KRT6AP02538 CROCCP5-201ENST00000436658 830 ntBASIC19■□□□□ 0.63
KRT6AP02538 AC006970.2-201ENST00000450065 779 ntBASIC19■□□□□ 0.63
KRT6AP02538 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KRT6AP02538 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19■□□□□ 0.63
KRT6AP02538 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19■□□□□ 0.63
KRT6AP02538 AL121832.2-201ENST00000610979 668 ntBASIC19■□□□□ 0.63
KRT6AP02538 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19■□□□□ 0.63
KRT6AP02538 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19■□□□□ 0.63
KRT6AP02538 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KRT6AP02538 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19■□□□□ 0.63
KRT6AP02538 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
KRT6AP02538 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
KRT6AP02538 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
KRT6AP02538 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
KRT6AP02538 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19■□□□□ 0.63
KRT6AP02538 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19■□□□□ 0.63
KRT6AP02538 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KRT6AP02538 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.99■□□□□ 0.63
KRT6AP02538 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRT6AP02538 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRT6AP02538 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.99■□□□□ 0.63
KRT6AP02538 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRT6AP02538 AC018553.1-201ENST00000616682 1458 ntBASIC18.99■□□□□ 0.63
KRT6AP02538 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRT6AP02538 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRT6AP02538 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.99■□□□□ 0.63
KRT6AP02538 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.99■□□□□ 0.63
KRT6AP02538 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRT6AP02538 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
KRT6AP02538 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
KRT6AP02538 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRT6AP02538 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.99■□□□□ 0.63
KRT6AP02538 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.99■□□□□ 0.63
KRT6AP02538 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
KRT6AP02538 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
KRT6AP02538 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.99■□□□□ 0.63
KRT6AP02538 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRT6AP02538 AC116351.2-201ENST00000606540 1585 ntBASIC18.98■□□□□ 0.63
KRT6AP02538 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
KRT6AP02538 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.98■□□□□ 0.63
KRT6AP02538 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRT6AP02538 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.98■□□□□ 0.63
KRT6AP02538 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
KRT6AP02538 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.98■□□□□ 0.63
KRT6AP02538 MIPEPP3-201ENST00000412105 444 ntBASIC18.98■□□□□ 0.63
KRT6AP02538 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.98■□□□□ 0.63
KRT6AP02538 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
KRT6AP02538 AC083906.2-201ENST00000511578 360 ntBASIC18.98■□□□□ 0.63
KRT6AP02538 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.98■□□□□ 0.63
KRT6AP02538 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.98■□□□□ 0.63
KRT6AP02538 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.98■□□□□ 0.63
KRT6AP02538 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.98■□□□□ 0.63
KRT6AP02538 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
KRT6AP02538 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRT6AP02538 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
KRT6AP02538 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRT6AP02538 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
KRT6AP02538 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT6AP02538 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT6AP02538 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.97■□□□□ 0.63
KRT6AP02538 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
KRT6AP02538 AC073210.2-201ENST00000430369 194 ntBASIC18.97■□□□□ 0.63
KRT6AP02538 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.97■□□□□ 0.63
KRT6AP02538 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.97■□□□□ 0.63
KRT6AP02538 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.97■□□□□ 0.63
KRT6AP02538 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.97■□□□□ 0.63
KRT6AP02538 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.97■□□□□ 0.63
KRT6AP02538 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.97■□□□□ 0.63
KRT6AP02538 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
KRT6AP02538 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
KRT6AP02538 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
KRT6AP02538 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.97■□□□□ 0.63
KRT6AP02538 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT6AP02538 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.97■□□□□ 0.63
KRT6AP02538 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.97■□□□□ 0.63
KRT6AP02538 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT6AP02538 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.97■□□□□ 0.63
KRT6AP02538 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT6AP02538 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KRT6AP02538 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT6AP02538 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
KRT6AP02538 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
KRT6AP02538 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT6AP02538 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.96■□□□□ 0.63
KRT6AP02538 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
KRT6AP02538 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.96■□□□□ 0.63
KRT6AP02538 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT6AP02538 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.96■□□□□ 0.63
KRT6AP02538 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT6AP02538 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
KRT6AP02538 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.96■□□□□ 0.63
KRT6AP02538 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.96■□□□□ 0.63
KRT6AP02538 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.96■□□□□ 0.63
KRT6AP02538 AC092118.2-201ENST00000613495 667 ntBASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms