Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
IFNA1P01562 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
IFNA1P01562 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IFNA1P01562 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IFNA1P01562 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IFNA1P01562 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
IFNA1P01562 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
IFNA1P01562 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
IFNA1P01562 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IFNA1P01562 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
IFNA1P01562 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC15.55■□□□□ 0.08
IFNA1P01562 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
IFNA1P01562 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC15.55■□□□□ 0.08
IFNA1P01562 AC018470.1-201ENST00000624790 3129 ntBASIC15.55■□□□□ 0.08
IFNA1P01562 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
IFNA1P01562 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IFNA1P01562 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC15.55■□□□□ 0.08
IFNA1P01562 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
IFNA1P01562 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC15.55■□□□□ 0.08
IFNA1P01562 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IFNA1P01562 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IFNA1P01562 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
IFNA1P01562 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IFNA1P01562 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
IFNA1P01562 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
IFNA1P01562 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
IFNA1P01562 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IFNA1P01562 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
IFNA1P01562 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IFNA1P01562 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
IFNA1P01562 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.54■□□□□ 0.08
IFNA1P01562 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC15.54■□□□□ 0.08
IFNA1P01562 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
IFNA1P01562 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
IFNA1P01562 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IFNA1P01562 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IFNA1P01562 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
IFNA1P01562 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IFNA1P01562 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
IFNA1P01562 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.54■□□□□ 0.08
IFNA1P01562 MOK-225ENST00000522867 1883 ntTSL 5 BASIC15.54■□□□□ 0.08
IFNA1P01562 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
IFNA1P01562 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IFNA1P01562 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC15.53■□□□□ 0.08
IFNA1P01562 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IFNA1P01562 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IFNA1P01562 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
IFNA1P01562 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
IFNA1P01562 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
IFNA1P01562 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IFNA1P01562 PCDHB18P-201ENST00000524813 2368 ntBASIC15.53■□□□□ 0.08
IFNA1P01562 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
IFNA1P01562 RNF146-205ENST00000477776 762 ntTSL 3 BASIC15.53■□□□□ 0.08
IFNA1P01562 MIR4787-201ENST00000607364 84 ntBASIC15.53■□□□□ 0.08
IFNA1P01562 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
IFNA1P01562 MIR6724-1-201ENST00000616420 92 ntBASIC15.53■□□□□ 0.08
IFNA1P01562 MIR6724-2-201ENST00000616483 92 ntBASIC15.53■□□□□ 0.08
IFNA1P01562 MIR6724-4-201ENST00000617390 92 ntBASIC15.53■□□□□ 0.08
IFNA1P01562 MIR6724-3-201ENST00000622482 92 ntBASIC15.53■□□□□ 0.08
IFNA1P01562 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IFNA1P01562 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.53■□□□□ 0.08
IFNA1P01562 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IFNA1P01562 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
IFNA1P01562 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
IFNA1P01562 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
IFNA1P01562 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC15.53■□□□□ 0.08
IFNA1P01562 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
IFNA1P01562 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
IFNA1P01562 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
IFNA1P01562 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
IFNA1P01562 AC009237.14-201ENST00000609975 1594 ntBASIC15.53■□□□□ 0.08
IFNA1P01562 SYT6-210ENST00000641643 1587 ntBASIC15.53■□□□□ 0.08
IFNA1P01562 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
IFNA1P01562 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
IFNA1P01562 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
IFNA1P01562 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC15.52■□□□□ 0.08
IFNA1P01562 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC15.52■□□□□ 0.08
IFNA1P01562 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
IFNA1P01562 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.52■□□□□ 0.08
IFNA1P01562 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
IFNA1P01562 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
IFNA1P01562 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
IFNA1P01562 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC15.52■□□□□ 0.08
IFNA1P01562 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC15.52■□□□□ 0.08
IFNA1P01562 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC15.52■□□□□ 0.08
IFNA1P01562 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
IFNA1P01562 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
IFNA1P01562 TSPY9P-201ENST00000440215 945 ntBASIC15.52■□□□□ 0.08
IFNA1P01562 TSPY11P-201ENST00000442607 1045 ntBASIC15.52■□□□□ 0.08
IFNA1P01562 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC15.52■□□□□ 0.08
IFNA1P01562 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
IFNA1P01562 AC245052.3-201ENST00000450182 901 ntBASIC15.52■□□□□ 0.08
IFNA1P01562 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
IFNA1P01562 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
IFNA1P01562 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC15.52■□□□□ 0.07
IFNA1P01562 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
IFNA1P01562 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
IFNA1P01562 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.52■□□□□ 0.07
IFNA1P01562 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC15.52■□□□□ 0.07
IFNA1P01562 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms