Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.54■□□□□ 0.4
CLDN1O95832 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN1O95832 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN1O95832 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN1O95832 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN1O95832 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.54■□□□□ 0.4
CLDN1O95832 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN1O95832 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CLDN1O95832 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN1O95832 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN1O95832 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN1O95832 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN1O95832 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN1O95832 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN1O95832 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN1O95832 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN1O95832 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN1O95832 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.53■□□□□ 0.4
CLDN1O95832 AC023632.3-201ENST00000521633 145 ntBASIC17.53■□□□□ 0.4
CLDN1O95832 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.53■□□□□ 0.4
CLDN1O95832 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN1O95832 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN1O95832 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.53■□□□□ 0.4
CLDN1O95832 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN1O95832 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN1O95832 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN1O95832 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN1O95832 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN1O95832 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN1O95832 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
CLDN1O95832 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN1O95832 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
CLDN1O95832 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.52■□□□□ 0.4
CLDN1O95832 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN1O95832 SLC25A24-204ENST00000569674 2357 ntBASIC17.52■□□□□ 0.4
CLDN1O95832 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CLDN1O95832 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN1O95832 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.52■□□□□ 0.4
CLDN1O95832 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN1O95832 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN1O95832 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CLDN1O95832 MESTP1-201ENST00000404287 994 ntBASIC17.52■□□□□ 0.4
CLDN1O95832 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN1O95832 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN1O95832 AP005242.2-201ENST00000580065 1175 ntBASIC17.52■□□□□ 0.4
CLDN1O95832 AC139887.4-201ENST00000607877 719 ntBASIC17.52■□□□□ 0.4
CLDN1O95832 AC093458.2-201ENST00000623150 629 ntBASIC17.52■□□□□ 0.4
CLDN1O95832 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.52■□□□□ 0.4
CLDN1O95832 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN1O95832 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN1O95832 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.52■□□□□ 0.39
CLDN1O95832 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
CLDN1O95832 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CLDN1O95832 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.52■□□□□ 0.39
CLDN1O95832 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLDN1O95832 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CLDN1O95832 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN1O95832 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN1O95832 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN1O95832 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN1O95832 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN1O95832 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN1O95832 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN1O95832 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN1O95832 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN1O95832 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN1O95832 RNF152P1-201ENST00000397754 604 ntBASIC17.51■□□□□ 0.39
CLDN1O95832 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.51■□□□□ 0.39
CLDN1O95832 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN1O95832 AC128688.1-201ENST00000487626 519 ntBASIC17.51■□□□□ 0.39
CLDN1O95832 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN1O95832 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
CLDN1O95832 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.51■□□□□ 0.39
CLDN1O95832 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN1O95832 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.51■□□□□ 0.39
CLDN1O95832 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CLDN1O95832 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CLDN1O95832 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN1O95832 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN1O95832 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN1O95832 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN1O95832 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.5■□□□□ 0.39
CLDN1O95832 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.5■□□□□ 0.39
CLDN1O95832 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN1O95832 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN1O95832 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN1O95832 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CLDN1O95832 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.5■□□□□ 0.39
CLDN1O95832 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN1O95832 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CLDN1O95832 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CLDN1O95832 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.5■□□□□ 0.39
CLDN1O95832 PCED1CP-201ENST00000419887 785 ntBASIC17.5■□□□□ 0.39
CLDN1O95832 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.5■□□□□ 0.39
CLDN1O95832 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.5■□□□□ 0.39
CLDN1O95832 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN1O95832 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.5■□□□□ 0.39
CLDN1O95832 AL031985.4-201ENST00000642138 673 ntBASIC17.5■□□□□ 0.39
CLDN1O95832 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN1O95832 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms