Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RNF13O43567 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
RNF13O43567 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
RNF13O43567 MIPEPP3-201ENST00000412105 444 ntBASIC17.85■□□□□ 0.45
RNF13O43567 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RNF13O43567 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF13O43567 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.85■□□□□ 0.45
RNF13O43567 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.85■□□□□ 0.45
RNF13O43567 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
RNF13O43567 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.85■□□□□ 0.45
RNF13O43567 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF13O43567 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.85■□□□□ 0.45
RNF13O43567 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
RNF13O43567 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.85■□□□□ 0.45
RNF13O43567 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF13O43567 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF13O43567 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RNF13O43567 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF13O43567 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF13O43567 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF13O43567 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
RNF13O43567 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RNF13O43567 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RNF13O43567 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF13O43567 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF13O43567 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF13O43567 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RNF13O43567 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.84■□□□□ 0.45
RNF13O43567 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF13O43567 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RNF13O43567 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.84■□□□□ 0.45
RNF13O43567 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RNF13O43567 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RNF13O43567 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF13O43567 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RNF13O43567 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.83■□□□□ 0.45
RNF13O43567 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.83■□□□□ 0.45
RNF13O43567 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RNF13O43567 AC093484.2-201ENST00000580996 2166 ntBASIC17.83■□□□□ 0.45
RNF13O43567 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RNF13O43567 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.83■□□□□ 0.44
RNF13O43567 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RNF13O43567 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF13O43567 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF13O43567 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.83■□□□□ 0.44
RNF13O43567 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF13O43567 GPX1P1-201ENST00000388829 606 ntBASIC17.83■□□□□ 0.44
RNF13O43567 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.83■□□□□ 0.44
RNF13O43567 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.83■□□□□ 0.44
RNF13O43567 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.83■□□□□ 0.44
RNF13O43567 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
RNF13O43567 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF13O43567 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF13O43567 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF13O43567 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF13O43567 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.83■□□□□ 0.44
RNF13O43567 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF13O43567 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF13O43567 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF13O43567 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.83■□□□□ 0.44
RNF13O43567 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.83■□□□□ 0.44
RNF13O43567 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
RNF13O43567 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF13O43567 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.83■□□□□ 0.44
RNF13O43567 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF13O43567 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF13O43567 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.82■□□□□ 0.44
RNF13O43567 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF13O43567 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF13O43567 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF13O43567 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF13O43567 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF13O43567 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF13O43567 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF13O43567 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF13O43567 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF13O43567 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF13O43567 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF13O43567 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.82■□□□□ 0.44
RNF13O43567 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF13O43567 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF13O43567 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.82■□□□□ 0.44
RNF13O43567 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.82■□□□□ 0.44
RNF13O43567 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF13O43567 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF13O43567 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF13O43567 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF13O43567 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF13O43567 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF13O43567 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RNF13O43567 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF13O43567 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF13O43567 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF13O43567 TREX1-205ENST00000625293 1783 ntBASIC17.81■□□□□ 0.44
RNF13O43567 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
RNF13O43567 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF13O43567 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF13O43567 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF13O43567 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF13O43567 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms