Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NDUFS4O43181 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
NDUFS4O43181 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.82■□□□□ 0.6
NDUFS4O43181 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
NDUFS4O43181 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NDUFS4O43181 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
NDUFS4O43181 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
NDUFS4O43181 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NDUFS4O43181 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
NDUFS4O43181 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
NDUFS4O43181 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NDUFS4O43181 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
NDUFS4O43181 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NDUFS4O43181 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.81■□□□□ 0.6
NDUFS4O43181 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NDUFS4O43181 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
NDUFS4O43181 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NDUFS4O43181 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NDUFS4O43181 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
NDUFS4O43181 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
NDUFS4O43181 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.81■□□□□ 0.6
NDUFS4O43181 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
NDUFS4O43181 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NDUFS4O43181 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NDUFS4O43181 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NDUFS4O43181 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NDUFS4O43181 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.81■□□□□ 0.6
NDUFS4O43181 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.81■□□□□ 0.6
NDUFS4O43181 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.81■□□□□ 0.6
NDUFS4O43181 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.81■□□□□ 0.6
NDUFS4O43181 MTDHP1-201ENST00000605323 784 ntBASIC18.81■□□□□ 0.6
NDUFS4O43181 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
NDUFS4O43181 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NDUFS4O43181 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
NDUFS4O43181 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
NDUFS4O43181 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NDUFS4O43181 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NDUFS4O43181 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
NDUFS4O43181 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NDUFS4O43181 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NDUFS4O43181 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NDUFS4O43181 AP006587.1-201ENST00000534129 1502 ntBASIC18.8■□□□□ 0.6
NDUFS4O43181 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NDUFS4O43181 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NDUFS4O43181 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NDUFS4O43181 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NDUFS4O43181 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NDUFS4O43181 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
NDUFS4O43181 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NDUFS4O43181 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.8■□□□□ 0.6
NDUFS4O43181 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NDUFS4O43181 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NDUFS4O43181 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.8■□□□□ 0.6
NDUFS4O43181 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
NDUFS4O43181 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NDUFS4O43181 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NDUFS4O43181 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDUFS4O43181 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.79■□□□□ 0.6
NDUFS4O43181 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDUFS4O43181 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDUFS4O43181 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NDUFS4O43181 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.79■□□□□ 0.6
NDUFS4O43181 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDUFS4O43181 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDUFS4O43181 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDUFS4O43181 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDUFS4O43181 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDUFS4O43181 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDUFS4O43181 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.79■□□□□ 0.6
NDUFS4O43181 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
NDUFS4O43181 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NDUFS4O43181 AC239809.2-201ENST00000415381 517 ntBASIC18.79■□□□□ 0.6
NDUFS4O43181 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.79■□□□□ 0.6
NDUFS4O43181 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.79■□□□□ 0.6
NDUFS4O43181 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
NDUFS4O43181 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.79■□□□□ 0.6
NDUFS4O43181 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.79■□□□□ 0.6
NDUFS4O43181 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.79■□□□□ 0.6
NDUFS4O43181 AL023875.1-201ENST00000640777 796 ntBASIC18.79■□□□□ 0.6
NDUFS4O43181 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NDUFS4O43181 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.79■□□□□ 0.6
NDUFS4O43181 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDUFS4O43181 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDUFS4O43181 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NDUFS4O43181 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.79■□□□□ 0.6
NDUFS4O43181 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
NDUFS4O43181 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
NDUFS4O43181 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDUFS4O43181 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NDUFS4O43181 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.78■□□□□ 0.6
NDUFS4O43181 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
NDUFS4O43181 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.78■□□□□ 0.6
NDUFS4O43181 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDUFS4O43181 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.78■□□□□ 0.6
NDUFS4O43181 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDUFS4O43181 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDUFS4O43181 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
NDUFS4O43181 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
NDUFS4O43181 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDUFS4O43181 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms