Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLOCKO15516 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.61■□□□□ 0.57
CLOCKO15516 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CLOCKO15516 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.61■□□□□ 0.57
CLOCKO15516 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CLOCKO15516 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.6■□□□□ 0.57
CLOCKO15516 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLOCKO15516 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
CLOCKO15516 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CLOCKO15516 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.6■□□□□ 0.57
CLOCKO15516 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.6■□□□□ 0.57
CLOCKO15516 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLOCKO15516 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
CLOCKO15516 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLOCKO15516 ID1-201ENST00000376105 1233 ntBASIC18.6■□□□□ 0.57
CLOCKO15516 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLOCKO15516 AC104187.1-201ENST00000607510 612 ntBASIC18.6■□□□□ 0.57
CLOCKO15516 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CLOCKO15516 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.6■□□□□ 0.57
CLOCKO15516 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CLOCKO15516 AL032819.2-201ENST00000624543 2162 ntBASIC18.59■□□□□ 0.57
CLOCKO15516 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.59■□□□□ 0.57
CLOCKO15516 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CLOCKO15516 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLOCKO15516 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.59■□□□□ 0.57
CLOCKO15516 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.59■□□□□ 0.57
CLOCKO15516 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLOCKO15516 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLOCKO15516 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.59■□□□□ 0.57
CLOCKO15516 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.59■□□□□ 0.57
CLOCKO15516 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.59■□□□□ 0.57
CLOCKO15516 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLOCKO15516 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.59■□□□□ 0.57
CLOCKO15516 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CLOCKO15516 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.59■□□□□ 0.57
CLOCKO15516 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.59■□□□□ 0.57
CLOCKO15516 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.59■□□□□ 0.57
CLOCKO15516 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.59■□□□□ 0.57
CLOCKO15516 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CLOCKO15516 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
CLOCKO15516 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.58■□□□□ 0.57
CLOCKO15516 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CLOCKO15516 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.58■□□□□ 0.57
CLOCKO15516 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CLOCKO15516 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CLOCKO15516 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLOCKO15516 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
CLOCKO15516 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLOCKO15516 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLOCKO15516 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.58■□□□□ 0.56
CLOCKO15516 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLOCKO15516 AC073111.5-205ENST00000641717 521 ntBASIC18.58■□□□□ 0.56
CLOCKO15516 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
CLOCKO15516 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLOCKO15516 LINC01465-201ENST00000408887 1940 ntBASIC18.58■□□□□ 0.56
CLOCKO15516 AC009237.14-201ENST00000609975 1594 ntBASIC18.58■□□□□ 0.56
CLOCKO15516 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLOCKO15516 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.58■□□□□ 0.56
CLOCKO15516 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLOCKO15516 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLOCKO15516 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLOCKO15516 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.58■□□□□ 0.56
CLOCKO15516 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLOCKO15516 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLOCKO15516 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLOCKO15516 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CLOCKO15516 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLOCKO15516 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.57■□□□□ 0.56
CLOCKO15516 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.57■□□□□ 0.56
CLOCKO15516 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CLOCKO15516 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.57■□□□□ 0.56
CLOCKO15516 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CLOCKO15516 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLOCKO15516 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLOCKO15516 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.57■□□□□ 0.56
CLOCKO15516 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.57■□□□□ 0.56
CLOCKO15516 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLOCKO15516 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLOCKO15516 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLOCKO15516 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLOCKO15516 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLOCKO15516 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.57■□□□□ 0.56
CLOCKO15516 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLOCKO15516 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.57■□□□□ 0.56
CLOCKO15516 KRT18P11-201ENST00000435214 1283 ntBASIC18.57■□□□□ 0.56
CLOCKO15516 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.57■□□□□ 0.56
CLOCKO15516 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLOCKO15516 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.57■□□□□ 0.56
CLOCKO15516 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CLOCKO15516 AP001160.3-201ENST00000601484 763 ntBASIC18.57■□□□□ 0.56
CLOCKO15516 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.57■□□□□ 0.56
CLOCKO15516 AL138781.2-201ENST00000617896 1843 ntBASIC18.57■□□□□ 0.56
CLOCKO15516 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLOCKO15516 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLOCKO15516 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLOCKO15516 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLOCKO15516 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLOCKO15516 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLOCKO15516 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLOCKO15516 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms