Protein–RNA interactions for Protein: O00189

AP4M1, AP-4 complex subunit mu-1, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4M1O00189 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP4M1O00189 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP4M1O00189 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP4M1O00189 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.14■□□□□ 0.17
AP4M1O00189 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
AP4M1O00189 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
AP4M1O00189 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.14■□□□□ 0.17
AP4M1O00189 KRT18P68-201ENST00000392293 1000 ntBASIC16.14■□□□□ 0.17
AP4M1O00189 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
AP4M1O00189 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.14■□□□□ 0.17
AP4M1O00189 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
AP4M1O00189 AC069152.1-201ENST00000438030 544 ntBASIC16.14■□□□□ 0.17
AP4M1O00189 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.14■□□□□ 0.17
AP4M1O00189 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.14■□□□□ 0.17
AP4M1O00189 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
AP4M1O00189 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
AP4M1O00189 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP4M1O00189 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
AP4M1O00189 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
AP4M1O00189 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
AP4M1O00189 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP4M1O00189 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
AP4M1O00189 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.14■□□□□ 0.17
AP4M1O00189 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.13■□□□□ 0.17
AP4M1O00189 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4M1O00189 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4M1O00189 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4M1O00189 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.13■□□□□ 0.17
AP4M1O00189 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
AP4M1O00189 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
AP4M1O00189 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
AP4M1O00189 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4M1O00189 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4M1O00189 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4M1O00189 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4M1O00189 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.13■□□□□ 0.17
AP4M1O00189 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.13■□□□□ 0.17
AP4M1O00189 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.13■□□□□ 0.17
AP4M1O00189 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4M1O00189 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4M1O00189 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
AP4M1O00189 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.13■□□□□ 0.17
AP4M1O00189 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
AP4M1O00189 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4M1O00189 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.13■□□□□ 0.17
AP4M1O00189 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.13■□□□□ 0.17
AP4M1O00189 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
AP4M1O00189 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
AP4M1O00189 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4M1O00189 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.13■□□□□ 0.17
AP4M1O00189 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP4M1O00189 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP4M1O00189 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
AP4M1O00189 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP4M1O00189 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.12■□□□□ 0.17
AP4M1O00189 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP4M1O00189 AC087633.2-202ENST00000565166 1439 ntBASIC16.12■□□□□ 0.17
AP4M1O00189 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
AP4M1O00189 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
AP4M1O00189 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
AP4M1O00189 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.12■□□□□ 0.17
AP4M1O00189 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP4M1O00189 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP4M1O00189 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP4M1O00189 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP4M1O00189 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
AP4M1O00189 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP4M1O00189 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.12■□□□□ 0.17
AP4M1O00189 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP4M1O00189 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
AP4M1O00189 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.12■□□□□ 0.17
AP4M1O00189 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.12■□□□□ 0.17
AP4M1O00189 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
AP4M1O00189 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.12■□□□□ 0.17
AP4M1O00189 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
AP4M1O00189 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.12■□□□□ 0.17
AP4M1O00189 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
AP4M1O00189 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.12■□□□□ 0.17
AP4M1O00189 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP4M1O00189 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
AP4M1O00189 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP4M1O00189 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
AP4M1O00189 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
AP4M1O00189 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
AP4M1O00189 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
AP4M1O00189 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
AP4M1O00189 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.12■□□□□ 0.17
AP4M1O00189 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
AP4M1O00189 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
AP4M1O00189 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.11■□□□□ 0.17
AP4M1O00189 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
AP4M1O00189 AL049812.1-201ENST00000432563 2267 ntBASIC16.11■□□□□ 0.17
AP4M1O00189 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP4M1O00189 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
AP4M1O00189 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.11■□□□□ 0.17
AP4M1O00189 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
AP4M1O00189 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.11■□□□□ 0.17
AP4M1O00189 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP4M1O00189 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP4M1O00189 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms