Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.9■□□□□ 0.46
NPIPA2E9PIF3 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.9■□□□□ 0.46
NPIPA2E9PIF3 BX088651.1-201ENST00000540551 451 ntBASIC17.9■□□□□ 0.46
NPIPA2E9PIF3 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.9■□□□□ 0.46
NPIPA2E9PIF3 AC004264.1-201ENST00000608354 794 ntBASIC17.9■□□□□ 0.46
NPIPA2E9PIF3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
NPIPA2E9PIF3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NPIPA2E9PIF3 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPIPA2E9PIF3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
NPIPA2E9PIF3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPIPA2E9PIF3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPIPA2E9PIF3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
NPIPA2E9PIF3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.89■□□□□ 0.46
NPIPA2E9PIF3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
NPIPA2E9PIF3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.89■□□□□ 0.46
NPIPA2E9PIF3 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
NPIPA2E9PIF3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NPIPA2E9PIF3 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NPIPA2E9PIF3 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
NPIPA2E9PIF3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.89■□□□□ 0.45
NPIPA2E9PIF3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
NPIPA2E9PIF3 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.89■□□□□ 0.45
NPIPA2E9PIF3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
NPIPA2E9PIF3 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.89■□□□□ 0.45
NPIPA2E9PIF3 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.89■□□□□ 0.45
NPIPA2E9PIF3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NPIPA2E9PIF3 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
NPIPA2E9PIF3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
NPIPA2E9PIF3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
NPIPA2E9PIF3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.89■□□□□ 0.45
NPIPA2E9PIF3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NPIPA2E9PIF3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NPIPA2E9PIF3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.89■□□□□ 0.45
NPIPA2E9PIF3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.89■□□□□ 0.45
NPIPA2E9PIF3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA2E9PIF3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA2E9PIF3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA2E9PIF3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA2E9PIF3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA2E9PIF3 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.88■□□□□ 0.45
NPIPA2E9PIF3 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA2E9PIF3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA2E9PIF3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
NPIPA2E9PIF3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA2E9PIF3 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA2E9PIF3 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA2E9PIF3 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA2E9PIF3 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.88■□□□□ 0.45
NPIPA2E9PIF3 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.88■□□□□ 0.45
NPIPA2E9PIF3 AF186192.3-201ENST00000583427 947 ntBASIC17.88■□□□□ 0.45
NPIPA2E9PIF3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.88■□□□□ 0.45
NPIPA2E9PIF3 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.88■□□□□ 0.45
NPIPA2E9PIF3 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA2E9PIF3 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA2E9PIF3 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA2E9PIF3 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.88■□□□□ 0.45
NPIPA2E9PIF3 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA2E9PIF3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA2E9PIF3 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.88■□□□□ 0.45
NPIPA2E9PIF3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.88■□□□□ 0.45
NPIPA2E9PIF3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA2E9PIF3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA2E9PIF3 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
NPIPA2E9PIF3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
NPIPA2E9PIF3 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NPIPA2E9PIF3 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NPIPA2E9PIF3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
NPIPA2E9PIF3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
NPIPA2E9PIF3 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.87■□□□□ 0.45
NPIPA2E9PIF3 AL162377.1-201ENST00000618844 1793 ntBASIC17.87■□□□□ 0.45
NPIPA2E9PIF3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NPIPA2E9PIF3 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NPIPA2E9PIF3 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NPIPA2E9PIF3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NPIPA2E9PIF3 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NPIPA2E9PIF3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.87■□□□□ 0.45
NPIPA2E9PIF3 AL353807.1-201ENST00000427475 662 ntBASIC17.87■□□□□ 0.45
NPIPA2E9PIF3 TSPY15P-201ENST00000457163 923 ntBASIC17.87■□□□□ 0.45
NPIPA2E9PIF3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
NPIPA2E9PIF3 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.87■□□□□ 0.45
NPIPA2E9PIF3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.87■□□□□ 0.45
NPIPA2E9PIF3 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.87■□□□□ 0.45
NPIPA2E9PIF3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NPIPA2E9PIF3 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
NPIPA2E9PIF3 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
NPIPA2E9PIF3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NPIPA2E9PIF3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
NPIPA2E9PIF3 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NPIPA2E9PIF3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.87■□□□□ 0.45
NPIPA2E9PIF3 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NPIPA2E9PIF3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
NPIPA2E9PIF3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NPIPA2E9PIF3 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
NPIPA2E9PIF3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
NPIPA2E9PIF3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.87■□□□□ 0.45
NPIPA2E9PIF3 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NPIPA2E9PIF3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NPIPA2E9PIF3 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NPIPA2E9PIF3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NPIPA2E9PIF3 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms