Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RBFOX3A6NFN3 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RBFOX3A6NFN3 AC012313.1-201ENST00000593393 3059 ntBASIC15.49■□□□□ 0.07
RBFOX3A6NFN3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RBFOX3A6NFN3 AC061975.6-201ENST00000579045 1553 ntBASIC15.49■□□□□ 0.07
RBFOX3A6NFN3 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
RBFOX3A6NFN3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RBFOX3A6NFN3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC15.49■□□□□ 0.07
RBFOX3A6NFN3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
RBFOX3A6NFN3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RBFOX3A6NFN3 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RBFOX3A6NFN3 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
RBFOX3A6NFN3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RBFOX3A6NFN3 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RBFOX3A6NFN3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC15.49■□□□□ 0.07
RBFOX3A6NFN3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC15.49■□□□□ 0.07
RBFOX3A6NFN3 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC15.49■□□□□ 0.07
RBFOX3A6NFN3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC15.49■□□□□ 0.07
RBFOX3A6NFN3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC15.49■□□□□ 0.07
RBFOX3A6NFN3 AC010997.5-201ENST00000609182 354 ntBASIC15.49■□□□□ 0.07
RBFOX3A6NFN3 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC15.49■□□□□ 0.07
RBFOX3A6NFN3 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RBFOX3A6NFN3 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
RBFOX3A6NFN3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC15.49■□□□□ 0.07
RBFOX3A6NFN3 PRORSD1P-202ENST00000563365 2154 ntBASIC15.49■□□□□ 0.07
RBFOX3A6NFN3 AC139713.2-201ENST00000641328 2723 ntBASIC15.49■□□□□ 0.07
RBFOX3A6NFN3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RBFOX3A6NFN3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
RBFOX3A6NFN3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
RBFOX3A6NFN3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
RBFOX3A6NFN3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RBFOX3A6NFN3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RBFOX3A6NFN3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RBFOX3A6NFN3 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
RBFOX3A6NFN3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.49■□□□□ 0.07
RBFOX3A6NFN3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RBFOX3A6NFN3 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RBFOX3A6NFN3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.48■□□□□ 0.07
RBFOX3A6NFN3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RBFOX3A6NFN3 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.48■□□□□ 0.07
RBFOX3A6NFN3 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RBFOX3A6NFN3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RBFOX3A6NFN3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.48■□□□□ 0.07
RBFOX3A6NFN3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC15.48■□□□□ 0.07
RBFOX3A6NFN3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RBFOX3A6NFN3 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC15.48■□□□□ 0.07
RBFOX3A6NFN3 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC15.48■□□□□ 0.07
RBFOX3A6NFN3 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RBFOX3A6NFN3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RBFOX3A6NFN3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC15.48■□□□□ 0.07
RBFOX3A6NFN3 RNF146-205ENST00000477776 762 ntTSL 3 BASIC15.48■□□□□ 0.07
RBFOX3A6NFN3 PRTG-204ENST00000561292 833 ntTSL 3 BASIC15.48■□□□□ 0.07
RBFOX3A6NFN3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RBFOX3A6NFN3 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
RBFOX3A6NFN3 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RBFOX3A6NFN3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC15.48■□□□□ 0.07
RBFOX3A6NFN3 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
RBFOX3A6NFN3 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
RBFOX3A6NFN3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC15.48■□□□□ 0.07
RBFOX3A6NFN3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RBFOX3A6NFN3 MKRN4P-201ENST00000444706 1521 ntBASIC15.48■□□□□ 0.07
RBFOX3A6NFN3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC15.47■□□□□ 0.07
RBFOX3A6NFN3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RBFOX3A6NFN3 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC15.47■□□□□ 0.07
RBFOX3A6NFN3 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RBFOX3A6NFN3 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RBFOX3A6NFN3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RBFOX3A6NFN3 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RBFOX3A6NFN3 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RBFOX3A6NFN3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RBFOX3A6NFN3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC15.47■□□□□ 0.07
RBFOX3A6NFN3 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RBFOX3A6NFN3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
RBFOX3A6NFN3 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RBFOX3A6NFN3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.47■□□□□ 0.07
RBFOX3A6NFN3 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
RBFOX3A6NFN3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RBFOX3A6NFN3 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RBFOX3A6NFN3 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RBFOX3A6NFN3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC15.47■□□□□ 0.07
RBFOX3A6NFN3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
RBFOX3A6NFN3 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RBFOX3A6NFN3 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.47■□□□□ 0.07
RBFOX3A6NFN3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RBFOX3A6NFN3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.47■□□□□ 0.07
RBFOX3A6NFN3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
RBFOX3A6NFN3 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
RBFOX3A6NFN3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC15.47■□□□□ 0.07
RBFOX3A6NFN3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RBFOX3A6NFN3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RBFOX3A6NFN3 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC15.47■□□□□ 0.07
RBFOX3A6NFN3 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RBFOX3A6NFN3 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RBFOX3A6NFN3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RBFOX3A6NFN3 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RBFOX3A6NFN3 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RBFOX3A6NFN3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.46■□□□□ 0.07
RBFOX3A6NFN3 OR6D1P-202ENST00000641007 5290 ntBASIC15.46■□□□□ 0.07
RBFOX3A6NFN3 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC15.46■□□□□ 0.07
RBFOX3A6NFN3 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms