Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
TRDV1A0A1B0GX56 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.28■□□□□ 0.36
TRDV1A0A1B0GX56 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TRDV1A0A1B0GX56 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRDV1A0A1B0GX56 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.27■□□□□ 0.36
TRDV1A0A1B0GX56 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.27■□□□□ 0.36
TRDV1A0A1B0GX56 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TRDV1A0A1B0GX56 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRDV1A0A1B0GX56 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRDV1A0A1B0GX56 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRDV1A0A1B0GX56 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.27■□□□□ 0.36
TRDV1A0A1B0GX56 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.27■□□□□ 0.36
TRDV1A0A1B0GX56 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.27■□□□□ 0.36
TRDV1A0A1B0GX56 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRDV1A0A1B0GX56 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.27■□□□□ 0.36
TRDV1A0A1B0GX56 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.27■□□□□ 0.36
TRDV1A0A1B0GX56 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC17.27■□□□□ 0.36
TRDV1A0A1B0GX56 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.27■□□□□ 0.36
TRDV1A0A1B0GX56 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRDV1A0A1B0GX56 KRT8P20-201ENST00000423953 1409 ntBASIC17.27■□□□□ 0.35
TRDV1A0A1B0GX56 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRDV1A0A1B0GX56 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
TRDV1A0A1B0GX56 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRDV1A0A1B0GX56 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRDV1A0A1B0GX56 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRDV1A0A1B0GX56 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRDV1A0A1B0GX56 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRDV1A0A1B0GX56 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRDV1A0A1B0GX56 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRDV1A0A1B0GX56 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRDV1A0A1B0GX56 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRDV1A0A1B0GX56 AC141586.3-201ENST00000562166 1838 ntBASIC17.26■□□□□ 0.35
TRDV1A0A1B0GX56 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.26■□□□□ 0.35
TRDV1A0A1B0GX56 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRDV1A0A1B0GX56 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.26■□□□□ 0.35
TRDV1A0A1B0GX56 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.26■□□□□ 0.35
TRDV1A0A1B0GX56 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRDV1A0A1B0GX56 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRDV1A0A1B0GX56 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRDV1A0A1B0GX56 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRDV1A0A1B0GX56 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TRDV1A0A1B0GX56 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.26■□□□□ 0.35
TRDV1A0A1B0GX56 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.26■□□□□ 0.35
TRDV1A0A1B0GX56 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.26■□□□□ 0.35
TRDV1A0A1B0GX56 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.26■□□□□ 0.35
TRDV1A0A1B0GX56 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRDV1A0A1B0GX56 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRDV1A0A1B0GX56 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRDV1A0A1B0GX56 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.26■□□□□ 0.35
TRDV1A0A1B0GX56 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRDV1A0A1B0GX56 AC020763.4-201ENST00000623414 4170 ntBASIC17.26■□□□□ 0.35
TRDV1A0A1B0GX56 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.26■□□□□ 0.35
TRDV1A0A1B0GX56 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRDV1A0A1B0GX56 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRDV1A0A1B0GX56 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRDV1A0A1B0GX56 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRDV1A0A1B0GX56 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRDV1A0A1B0GX56 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.26■□□□□ 0.35
TRDV1A0A1B0GX56 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRDV1A0A1B0GX56 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.25■□□□□ 0.35
TRDV1A0A1B0GX56 AL031598.1-201ENST00000561511 1773 ntBASIC17.25■□□□□ 0.35
TRDV1A0A1B0GX56 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.25■□□□□ 0.35
TRDV1A0A1B0GX56 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TRDV1A0A1B0GX56 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRDV1A0A1B0GX56 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TRDV1A0A1B0GX56 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRDV1A0A1B0GX56 EDA-201ENST00000338901 1233 ntBASIC17.25■□□□□ 0.35
TRDV1A0A1B0GX56 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRDV1A0A1B0GX56 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRDV1A0A1B0GX56 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.25■□□□□ 0.35
TRDV1A0A1B0GX56 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRDV1A0A1B0GX56 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.25■□□□□ 0.35
TRDV1A0A1B0GX56 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.25■□□□□ 0.35
TRDV1A0A1B0GX56 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRDV1A0A1B0GX56 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRDV1A0A1B0GX56 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRDV1A0A1B0GX56 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
TRDV1A0A1B0GX56 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRDV1A0A1B0GX56 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRDV1A0A1B0GX56 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRDV1A0A1B0GX56 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.24■□□□□ 0.35
TRDV1A0A1B0GX56 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.24■□□□□ 0.35
TRDV1A0A1B0GX56 WIZP1-201ENST00000531444 2299 ntBASIC17.24■□□□□ 0.35
TRDV1A0A1B0GX56 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.24■□□□□ 0.35
TRDV1A0A1B0GX56 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRDV1A0A1B0GX56 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRDV1A0A1B0GX56 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
TRDV1A0A1B0GX56 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRDV1A0A1B0GX56 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRDV1A0A1B0GX56 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRDV1A0A1B0GX56 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.24■□□□□ 0.35
TRDV1A0A1B0GX56 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.24■□□□□ 0.35
TRDV1A0A1B0GX56 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRDV1A0A1B0GX56 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRDV1A0A1B0GX56 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.24■□□□□ 0.35
TRDV1A0A1B0GX56 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRDV1A0A1B0GX56 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRDV1A0A1B0GX56 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
TRDV1A0A1B0GX56 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.24■□□□□ 0.35
TRDV1A0A1B0GX56 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms