Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 IKBKGP1-201ENST00000612193 1073 ntBASIC15.8■□□□□ 0.12
TRAV3A0A0B4J244 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV3A0A0B4J244 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV3A0A0B4J244 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
TRAV3A0A0B4J244 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
TRAV3A0A0B4J244 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TRAV3A0A0B4J244 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV3A0A0B4J244 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV3A0A0B4J244 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV3A0A0B4J244 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV3A0A0B4J244 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV3A0A0B4J244 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV3A0A0B4J244 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV3A0A0B4J244 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV3A0A0B4J244 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV3A0A0B4J244 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV3A0A0B4J244 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TRAV3A0A0B4J244 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV3A0A0B4J244 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TRAV3A0A0B4J244 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV3A0A0B4J244 GPX1P1-201ENST00000388829 606 ntBASIC15.79■□□□□ 0.12
TRAV3A0A0B4J244 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRAV3A0A0B4J244 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC15.79■□□□□ 0.12
TRAV3A0A0B4J244 PHB2-213ENST00000546111 858 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV3A0A0B4J244 AC080038.1-201ENST00000611274 1154 ntBASIC15.79■□□□□ 0.12
TRAV3A0A0B4J244 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV3A0A0B4J244 AL050303.2-201ENST00000619798 666 ntBASIC15.79■□□□□ 0.12
TRAV3A0A0B4J244 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC15.79■□□□□ 0.12
TRAV3A0A0B4J244 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV3A0A0B4J244 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV3A0A0B4J244 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV3A0A0B4J244 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV3A0A0B4J244 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV3A0A0B4J244 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV3A0A0B4J244 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRAV3A0A0B4J244 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV3A0A0B4J244 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV3A0A0B4J244 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TRAV3A0A0B4J244 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC15.78■□□□□ 0.12
TRAV3A0A0B4J244 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC15.78■□□□□ 0.12
TRAV3A0A0B4J244 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
TRAV3A0A0B4J244 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV3A0A0B4J244 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV3A0A0B4J244 AC018553.1-201ENST00000616682 1458 ntBASIC15.78■□□□□ 0.12
TRAV3A0A0B4J244 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV3A0A0B4J244 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV3A0A0B4J244 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV3A0A0B4J244 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV3A0A0B4J244 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC15.78■□□□□ 0.12
TRAV3A0A0B4J244 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC15.78■□□□□ 0.12
TRAV3A0A0B4J244 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV3A0A0B4J244 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV3A0A0B4J244 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV3A0A0B4J244 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV3A0A0B4J244 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV3A0A0B4J244 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV3A0A0B4J244 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV3A0A0B4J244 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV3A0A0B4J244 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV3A0A0B4J244 AC133552.2-202ENST00000575694 574 ntBASIC15.78■□□□□ 0.12
TRAV3A0A0B4J244 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC15.78■□□□□ 0.12
TRAV3A0A0B4J244 AC073111.5-205ENST00000641717 521 ntBASIC15.78■□□□□ 0.12
TRAV3A0A0B4J244 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TRAV3A0A0B4J244 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV3A0A0B4J244 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
TRAV3A0A0B4J244 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV3A0A0B4J244 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV3A0A0B4J244 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV3A0A0B4J244 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV3A0A0B4J244 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV3A0A0B4J244 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV3A0A0B4J244 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC15.78■□□□□ 0.12
TRAV3A0A0B4J244 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC15.78■□□□□ 0.12
TRAV3A0A0B4J244 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV3A0A0B4J244 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV3A0A0B4J244 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV3A0A0B4J244 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV3A0A0B4J244 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
TRAV3A0A0B4J244 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV3A0A0B4J244 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV3A0A0B4J244 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV3A0A0B4J244 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV3A0A0B4J244 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV3A0A0B4J244 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV3A0A0B4J244 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV3A0A0B4J244 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC15.77■□□□□ 0.12
TRAV3A0A0B4J244 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC15.77■□□□□ 0.12
TRAV3A0A0B4J244 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
TRAV3A0A0B4J244 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC15.77■□□□□ 0.12
TRAV3A0A0B4J244 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV3A0A0B4J244 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV3A0A0B4J244 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC15.77■□□□□ 0.11
TRAV3A0A0B4J244 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC15.77■□□□□ 0.11
TRAV3A0A0B4J244 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV3A0A0B4J244 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV3A0A0B4J244 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
TRAV3A0A0B4J244 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV3A0A0B4J244 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV3A0A0B4J244 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
TRAV3A0A0B4J244 MCC-208ENST00000514701 2855 ntTSL 2 BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms