Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.42■□□□□ 0.54
TRBV5-3A0A0A0MS03 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV5-3A0A0A0MS03 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TRBV5-3A0A0A0MS03 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV5-3A0A0A0MS03 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV5-3A0A0A0MS03 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.42■□□□□ 0.54
TRBV5-3A0A0A0MS03 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV5-3A0A0A0MS03 AL049812.1-201ENST00000432563 2267 ntBASIC18.42■□□□□ 0.54
TRBV5-3A0A0A0MS03 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TRBV5-3A0A0A0MS03 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TRBV5-3A0A0A0MS03 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV5-3A0A0A0MS03 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV5-3A0A0A0MS03 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV5-3A0A0A0MS03 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV5-3A0A0A0MS03 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV5-3A0A0A0MS03 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV5-3A0A0A0MS03 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV5-3A0A0A0MS03 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV5-3A0A0A0MS03 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV5-3A0A0A0MS03 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV5-3A0A0A0MS03 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.41■□□□□ 0.54
TRBV5-3A0A0A0MS03 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
TRBV5-3A0A0A0MS03 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TRBV5-3A0A0A0MS03 AC026271.2-201ENST00000428091 497 ntBASIC18.41■□□□□ 0.54
TRBV5-3A0A0A0MS03 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.41■□□□□ 0.54
TRBV5-3A0A0A0MS03 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.41■□□□□ 0.54
TRBV5-3A0A0A0MS03 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV5-3A0A0A0MS03 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.41■□□□□ 0.54
TRBV5-3A0A0A0MS03 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV5-3A0A0A0MS03 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
TRBV5-3A0A0A0MS03 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV5-3A0A0A0MS03 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV5-3A0A0A0MS03 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV5-3A0A0A0MS03 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
TRBV5-3A0A0A0MS03 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TRBV5-3A0A0A0MS03 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TRBV5-3A0A0A0MS03 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.4■□□□□ 0.54
TRBV5-3A0A0A0MS03 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.4■□□□□ 0.54
TRBV5-3A0A0A0MS03 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.4■□□□□ 0.54
TRBV5-3A0A0A0MS03 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.4■□□□□ 0.54
TRBV5-3A0A0A0MS03 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.4■□□□□ 0.54
TRBV5-3A0A0A0MS03 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV5-3A0A0A0MS03 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV5-3A0A0A0MS03 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV5-3A0A0A0MS03 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
TRBV5-3A0A0A0MS03 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV5-3A0A0A0MS03 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.4■□□□□ 0.54
TRBV5-3A0A0A0MS03 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV5-3A0A0A0MS03 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.4■□□□□ 0.54
TRBV5-3A0A0A0MS03 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.4■□□□□ 0.54
TRBV5-3A0A0A0MS03 NEFHP1-201ENST00000412845 2629 ntBASIC18.4■□□□□ 0.54
TRBV5-3A0A0A0MS03 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.4■□□□□ 0.54
TRBV5-3A0A0A0MS03 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV5-3A0A0A0MS03 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.4■□□□□ 0.54
TRBV5-3A0A0A0MS03 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.4■□□□□ 0.54
TRBV5-3A0A0A0MS03 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
TRBV5-3A0A0A0MS03 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
TRBV5-3A0A0A0MS03 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-3A0A0A0MS03 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-3A0A0A0MS03 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
TRBV5-3A0A0A0MS03 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-3A0A0A0MS03 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-3A0A0A0MS03 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-3A0A0A0MS03 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-3A0A0A0MS03 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TRBV5-3A0A0A0MS03 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-3A0A0A0MS03 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-3A0A0A0MS03 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.39■□□□□ 0.53
TRBV5-3A0A0A0MS03 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.39■□□□□ 0.53
TRBV5-3A0A0A0MS03 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.39■□□□□ 0.53
TRBV5-3A0A0A0MS03 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-3A0A0A0MS03 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-3A0A0A0MS03 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-3A0A0A0MS03 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.39■□□□□ 0.53
TRBV5-3A0A0A0MS03 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-3A0A0A0MS03 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-3A0A0A0MS03 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-3A0A0A0MS03 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TRBV5-3A0A0A0MS03 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TRBV5-3A0A0A0MS03 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV5-3A0A0A0MS03 AC006333.2-201ENST00000607957 2099 ntBASIC18.38■□□□□ 0.53
TRBV5-3A0A0A0MS03 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV5-3A0A0A0MS03 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.38■□□□□ 0.53
TRBV5-3A0A0A0MS03 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
TRBV5-3A0A0A0MS03 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV5-3A0A0A0MS03 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV5-3A0A0A0MS03 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
TRBV5-3A0A0A0MS03 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.38■□□□□ 0.53
TRBV5-3A0A0A0MS03 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.38■□□□□ 0.53
TRBV5-3A0A0A0MS03 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
TRBV5-3A0A0A0MS03 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.38■□□□□ 0.53
TRBV5-3A0A0A0MS03 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.38■□□□□ 0.53
TRBV5-3A0A0A0MS03 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
TRBV5-3A0A0A0MS03 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.38■□□□□ 0.53
TRBV5-3A0A0A0MS03 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.38■□□□□ 0.53
TRBV5-3A0A0A0MS03 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.38■□□□□ 0.53
TRBV5-3A0A0A0MS03 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV5-3A0A0A0MS03 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV5-3A0A0A0MS03 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
TRBV5-3A0A0A0MS03 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms