Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV25-1A0A075B6N4 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TRBV25-1A0A075B6N4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC14.14□□□□□ -0.15
TRBV25-1A0A075B6N4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV25-1A0A075B6N4 AC018470.1-201ENST00000624790 3129 ntBASIC14.14□□□□□ -0.15
TRBV25-1A0A075B6N4 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV25-1A0A075B6N4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV25-1A0A075B6N4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV25-1A0A075B6N4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV25-1A0A075B6N4 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC14.14□□□□□ -0.15
TRBV25-1A0A075B6N4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
TRBV25-1A0A075B6N4 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV25-1A0A075B6N4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV25-1A0A075B6N4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV25-1A0A075B6N4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV25-1A0A075B6N4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
TRBV25-1A0A075B6N4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC14.13□□□□□ -0.15
TRBV25-1A0A075B6N4 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
TRBV25-1A0A075B6N4 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV25-1A0A075B6N4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
TRBV25-1A0A075B6N4 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV25-1A0A075B6N4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV25-1A0A075B6N4 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.13□□□□□ -0.15
TRBV25-1A0A075B6N4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
TRBV25-1A0A075B6N4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV25-1A0A075B6N4 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC14.13□□□□□ -0.15
TRBV25-1A0A075B6N4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV25-1A0A075B6N4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV25-1A0A075B6N4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC14.13□□□□□ -0.15
TRBV25-1A0A075B6N4 PGM5P4-201ENST00000421970 445 ntBASIC14.13□□□□□ -0.15
TRBV25-1A0A075B6N4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
TRBV25-1A0A075B6N4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC14.13□□□□□ -0.15
TRBV25-1A0A075B6N4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
TRBV25-1A0A075B6N4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC14.13□□□□□ -0.15
TRBV25-1A0A075B6N4 FGF8-207ENST00000618991 856 ntTSL 3 BASIC14.13□□□□□ -0.15
TRBV25-1A0A075B6N4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV25-1A0A075B6N4 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC14.13□□□□□ -0.15
TRBV25-1A0A075B6N4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC14.13□□□□□ -0.15
TRBV25-1A0A075B6N4 AP000997.3-201ENST00000623333 2250 ntBASIC14.13□□□□□ -0.15
TRBV25-1A0A075B6N4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC14.13□□□□□ -0.15
TRBV25-1A0A075B6N4 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV25-1A0A075B6N4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV25-1A0A075B6N4 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV25-1A0A075B6N4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV25-1A0A075B6N4 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC14.13□□□□□ -0.15
TRBV25-1A0A075B6N4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV25-1A0A075B6N4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC14.13□□□□□ -0.15
TRBV25-1A0A075B6N4 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV25-1A0A075B6N4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV25-1A0A075B6N4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV25-1A0A075B6N4 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
TRBV25-1A0A075B6N4 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV25-1A0A075B6N4 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
TRBV25-1A0A075B6N4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV25-1A0A075B6N4 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC14.12□□□□□ -0.15
TRBV25-1A0A075B6N4 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV25-1A0A075B6N4 PWWP2AP1-201ENST00000429776 2273 ntBASIC14.12□□□□□ -0.15
TRBV25-1A0A075B6N4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC14.12□□□□□ -0.15
TRBV25-1A0A075B6N4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV25-1A0A075B6N4 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV25-1A0A075B6N4 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV25-1A0A075B6N4 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
TRBV25-1A0A075B6N4 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
TRBV25-1A0A075B6N4 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
TRBV25-1A0A075B6N4 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.12□□□□□ -0.15
TRBV25-1A0A075B6N4 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV25-1A0A075B6N4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV25-1A0A075B6N4 AC097381.1-201ENST00000429019 1296 ntBASIC14.12□□□□□ -0.15
TRBV25-1A0A075B6N4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC14.12□□□□□ -0.15
TRBV25-1A0A075B6N4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC14.12□□□□□ -0.15
TRBV25-1A0A075B6N4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC14.12□□□□□ -0.15
TRBV25-1A0A075B6N4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.12□□□□□ -0.15
TRBV25-1A0A075B6N4 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV25-1A0A075B6N4 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV25-1A0A075B6N4 NOC2LP1-202ENST00000452600 2235 ntBASIC14.12□□□□□ -0.15
TRBV25-1A0A075B6N4 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV25-1A0A075B6N4 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV25-1A0A075B6N4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC14.12□□□□□ -0.15
TRBV25-1A0A075B6N4 RBM17P2-201ENST00000616397 1405 ntBASIC14.12□□□□□ -0.15
TRBV25-1A0A075B6N4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC14.12□□□□□ -0.15
TRBV25-1A0A075B6N4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC14.12□□□□□ -0.15
TRBV25-1A0A075B6N4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV25-1A0A075B6N4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV25-1A0A075B6N4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV25-1A0A075B6N4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV25-1A0A075B6N4 Z82202.1-201ENST00000623446 1880 ntBASIC14.12□□□□□ -0.15
TRBV25-1A0A075B6N4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TRBV25-1A0A075B6N4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV25-1A0A075B6N4 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV25-1A0A075B6N4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC14.12□□□□□ -0.15
TRBV25-1A0A075B6N4 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
TRBV25-1A0A075B6N4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV25-1A0A075B6N4 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV25-1A0A075B6N4 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV25-1A0A075B6N4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
TRBV25-1A0A075B6N4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV25-1A0A075B6N4 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV25-1A0A075B6N4 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV25-1A0A075B6N4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV25-1A0A075B6N4 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms