Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 NFASC-201ENST00000339876 10333 ntAPPRIS ALT1 TSL 5 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 ZNF574-204ENST00000600245 3598 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 ARHGEF3-201ENST00000296315 3602 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 AC096636.1-201ENST00000625140 3618 ntBASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 C11orf57-209ENST00000532163 3739 ntTSL 2 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 ADD2-205ENST00000413157 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 C16orf62-201ENST00000251143 3894 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 SMARCA1-202ENST00000371122 4099 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 PC-203ENST00000393960 4192 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 MSC-AS1-201ENST00000457356 4220 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 TRAF1-202ENST00000540010 4303 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 CUX1-201ENST00000292535 13747 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 OGFOD1-207ENST00000566157 4647 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 LIMCH1-208ENST00000508501 5054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 LIMCH1-217ENST00000512946 5057 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 CLTCL1-211ENST00000621271 5313 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 LIMCH1-202ENST00000381753 5705 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 NCAM1-201ENST00000316851 5837 ntTSL 5 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 NCAM1-222ENST00000615285 6045 ntTSL 5 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 APOC3-201ENST00000227667 550 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 COPB1-201ENST00000249923 3481 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 WISP1-202ENST00000250160 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 C14orf159-201ENST00000256324 2967 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 PALLD-201ENST00000261509 5809 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 VAMP8-201ENST00000263864 774 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 IL22RA1-201ENST00000270800 2798 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 SCLT1-201ENST00000281142 3055 ntAPPRIS P3 TSL 2 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 FCGR3B-201ENST00000294800 2385 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 TRIM40-205ENST00000307859 1640 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 ALAS1-201ENST00000310271 2212 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 C1orf64-201ENST00000329454 3039 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 C19orf71-201ENST00000329493 674 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 NRIP2-201ENST00000337508 2746 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 AK5-202ENST00000344720 3929 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 MYL4-201ENST00000354968 907 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 AC079612.1-201ENST00000358775 3700 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 RNU6-1094P-201ENST00000362416 104 ntBASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 RNA5S9-201ENST00000364451 119 ntBASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 Y_RNA.298-201ENST00000364960 107 ntBASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 SNORD115-7-201ENST00000365306 82 ntBASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 Y_RNA.362-201ENST00000365518 110 ntBASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 SNORD18B-201ENST00000365659 72 ntBASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 PM20D1-201ENST00000367136 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 C1orf61-204ENST00000368243 879 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 GSTM5-202ENST00000369812 657 ntTSL 5 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 GSTM2-202ENST00000369827 1073 ntTSL 5 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 ENTPD7-201ENST00000370489 3550 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 STAU1-207ENST00000371856 3684 ntAPPRIS P4 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 PRKG1-204ENST00000373985 6487 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 UQCC1-203ENST00000374380 2133 ntTSL 2 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 EPHB2-203ENST00000374632 3677 ntAPPRIS P4 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 AL662899.3-201ENST00000375880 2487 ntAPPRIS P1 TSL 3 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 NCR3-203ENST00000376072 875 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 C9orf64-202ENST00000376340 620 ntTSL 5 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 SCGB2B2-201ENST00000379204 426 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 TPTE2P5-201ENST00000379515 450 ntTSL 5 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 AL157713.1-201ENST00000379752 1531 ntBASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 NET1-202ENST00000380359 3253 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 EXOC1-203ENST00000381295 3551 ntAPPRIS P4 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 Y_RNA.534-201ENST00000384599 112 ntBASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 MIR182-201ENST00000385255 110 ntBASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 MIR616-201ENST00000385293 97 ntBASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 IGHV4-28-201ENST00000390612 425 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 RNU6-644P-201ENST00000391155 98 ntBASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 PGRMC2-202ENST00000394276 2858 ntTSL 2 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 ACTN1-203ENST00000394419 3464 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 AGPAT1-206ENST00000395499 2496 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 LPIN1-203ENST00000396098 1761 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 MT1P1-201ENST00000396160 183 ntBASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 AC073091.1-201ENST00000398059 864 ntBASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 GMPR2-203ENST00000399440 1652 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 AL512604.1-201ENST00000404812 257 ntBASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 ACTG2-202ENST00000409624 2064 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 AC245060.2-201ENST00000412149 524 ntTSL 3 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 AC097638.1-201ENST00000413663 515 ntBASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 AURKC-202ENST00000415300 978 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 CCDC32-202ENST00000416810 1519 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 AC011247.1-202ENST00000417039 1156 ntTSL 5 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 SNRPCP9-201ENST00000417250 207 ntBASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 BTF3P9-201ENST00000418784 283 ntBASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 SEMA3C-203ENST00000419255 2415 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 BX664727.2-201ENST00000420308 228 ntBASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 ADGRF3-203ENST00000421160 3353 ntAPPRIS ALT2 TSL 2 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 ZNF714-201ENST00000425625 2562 ntTSL 5 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 AC004941.2-201ENST00000427009 228 ntBASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 TRIM26BP-206ENST00000427723 753 ntBASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 CHCHD2P1-201ENST00000429986 443 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms