RNA–Protein interactions for RNA: ENST00000615285.4

NCAM1-222, Transcript of neural cell adhesion molecule 1, human

TSL 5 BASIC

Gene NCAM1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAM1-222	ENST00000615285	NISCH	Q9Y2I1	1504 aa		17.35	■□□□□ 0.37
NCAM1-222	ENST00000615285	DCAF8L2	P0C7V8	631 aa		17.04	■□□□□ 0.32
NCAM1-222	ENST00000615285	SUPT5H	O00267	1087 aa	Known RBP	15.82	■□□□□ 0.12
NCAM1-222	ENST00000615285	SHROOM4	Q9ULL8	1493 aa		15.75	■□□□□ 0.11
NCAM1-222	ENST00000615285	FAM9A	Q8IZU1	332 aa	Predicted RBP	15.5	■□□□□ 0.07
NCAM1-222	ENST00000615285	APLP2	Q06481	763 aa		15.24	■□□□□ 0.03
NCAM1-222	ENST00000615285	ABCC9	O60706	1549 aa		14.95	□□□□□ -0.02
NCAM1-222	ENST00000615285	EHMT2	Q96KQ7	1210 aa		14.94	□□□□□ -0.02
NCAM1-222	ENST00000615285	TRIM41	Q8WV44	630 aa		14.92	□□□□□ -0.02
NCAM1-222	ENST00000615285	CCDC180	Q9P1Z9	1646 aa		14.74	□□□□□ -0.05
NCAM1-222	ENST00000615285	UBTF	P17480	764 aa	Known RBP	14.69	□□□□□ -0.06
NCAM1-222	ENST00000615285	ATP1B4	Q9UN42	357 aa	Predicted RBP	14.64	□□□□□ -0.07
NCAM1-222	ENST00000615285	PELP1	Q8IZL8	1130 aa	Known RBP	14.59	□□□□□ -0.07
NCAM1-222	ENST00000615285	RANGAP1	P46060	587 aa	Predicted RBP	14.58	□□□□□ -0.08
NCAM1-222	ENST00000615285	PABPN1	Q86U42	306 aa	Known RBP eCLIP	14.56	□□□□□ -0.08
NCAM1-222	ENST00000615285	TTBK1	Q5TCY1	1321 aa	Predicted RBP	14.42	□□□□□ -0.1
NCAM1-222	ENST00000615285	ZEB1	P37275	1124 aa	Predicted RBP	14.41	□□□□□ -0.1
NCAM1-222	ENST00000615285	RB1CC1	Q8TDY2	1594 aa		14.38	□□□□□ -0.11
NCAM1-222	ENST00000615285	ZCCHC6	Q5VYS8	1495 aa	Known RBP	14.37	□□□□□ -0.11
NCAM1-222	ENST00000615285	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	14.34	□□□□□ -0.11
NCAM1-222	ENST00000615285	HNRNPUL2	Q1KMD3	747 aa	Known RBP	14.34	□□□□□ -0.11
NCAM1-222	ENST00000615285	SCRIB	Q14160	1630 aa		14.29	□□□□□ -0.12
NCAM1-222	ENST00000615285	MYT1L	Q9UL68	1186 aa		14.28	□□□□□ -0.12
NCAM1-222	ENST00000615285	NACAD	O15069	1562 aa		14.25	□□□□□ -0.13
NCAM1-222	ENST00000615285	PCGF6	Q9BYE7	350 aa		14.25	□□□□□ -0.13
NCAM1-222	ENST00000615285	CCER1	Q8TC90	406 aa	Predicted RBP	14.25	□□□□□ -0.13
NCAM1-222	ENST00000615285	CHIC1	Q5VXU3	224 aa		14.14	□□□□□ -0.15
NCAM1-222	ENST00000615285	TRIM26	Q12899	539 aa	Predicted RBP	14.04	□□□□□ -0.16
NCAM1-222	ENST00000615285	FBLN2	P98095	1184 aa		14.02	□□□□□ -0.17
NCAM1-222	ENST00000615285	DCAF1	Q9Y4B6	1507 aa		13.98	□□□□□ -0.17
NCAM1-222	ENST00000615285	CENPB	P07199	599 aa	Predicted RBP	13.96	□□□□□ -0.17
NCAM1-222	ENST00000615285	ITGAE	P38570	1179 aa		13.94	□□□□□ -0.18
NCAM1-222	ENST00000615285	YTHDC1	Q96MU7	727 aa	Known RBP	13.92	□□□□□ -0.18
NCAM1-222	ENST00000615285	ERICH6	Q7L0X2	663 aa		13.92	□□□□□ -0.18
NCAM1-222	ENST00000615285	CDK11A	Q9UQ88	783 aa	Predicted RBP	13.89	□□□□□ -0.19
NCAM1-222	ENST00000615285	PPARGC1B	Q86YN6	1023 aa	Known RBP	13.85	□□□□□ -0.19
NCAM1-222	ENST00000615285	CSRNP3	Q8WYN3	585 aa		13.85	□□□□□ -0.19
NCAM1-222	ENST00000615285	LOC105371045	A0A1W2PR82	267 aa		13.84	□□□□□ -0.19
NCAM1-222	ENST00000615285	FAM50A	Q14320	339 aa	Known RBP	13.84	□□□□□ -0.19
NCAM1-222	ENST00000615285	NPM1	P06748	294 aa	Known RBP eCLIP	13.82	□□□□□ -0.2
NCAM1-222	ENST00000615285	BAZ1B	Q9UIG0	1483 aa	Known RBP	13.81	□□□□□ -0.2
NCAM1-222	ENST00000615285	NEFL	P07196	543 aa		13.79	□□□□□ -0.2
NCAM1-222	ENST00000615285	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	13.76	□□□□□ -0.21
NCAM1-222	ENST00000615285	TRIM52	Q96A61	297 aa		13.75	□□□□□ -0.21
NCAM1-222	ENST00000615285	MYO15B	Q96JP2	1530 aa		13.73	□□□□□ -0.21
NCAM1-222	ENST00000615285	POLR3GL	Q9BT43	218 aa		13.68	□□□□□ -0.22
NCAM1-222	ENST00000615285	CHMP7	Q8WUX9	453 aa	Predicted RBP	13.67	□□□□□ -0.22
NCAM1-222	ENST00000615285	ERCC6	Q03468	1493 aa		13.67	□□□□□ -0.22
NCAM1-222	ENST00000615285	ESF1	Q9H501	851 aa	Known RBP	13.67	□□□□□ -0.22
NCAM1-222	ENST00000615285	EEA1	Q15075	1411 aa		13.65	□□□□□ -0.22
NCAM1-222	ENST00000615285	RSF1	Q96T23	1441 aa	Predicted RBP	13.64	□□□□□ -0.23
NCAM1-222	ENST00000615285	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.62	□□□□□ -0.23
NCAM1-222	ENST00000615285	P3H3	Q8IVL6	736 aa		13.61	□□□□□ -0.23
NCAM1-222	ENST00000615285	SMARCA2	P51531	1590 aa		13.61	□□□□□ -0.23
NCAM1-222	ENST00000615285	MYT1	Q01538	1121 aa		13.58	□□□□□ -0.24
NCAM1-222	ENST00000615285	ZNF777	Q9ULD5	760 aa	Predicted RBP	13.54	□□□□□ -0.24
NCAM1-222	ENST00000615285	ACIN1	Q9UKV3	1341 aa	Known RBP	13.53	□□□□□ -0.24
NCAM1-222	ENST00000615285	WRN	Q14191	1432 aa	Predicted RBP eCLIP	13.53	□□□□□ -0.24
NCAM1-222	ENST00000615285	KIF27	Q86VH2	1401 aa		13.52	□□□□□ -0.25
NCAM1-222	ENST00000615285	BCAN	Q96GW7	911 aa		13.5	□□□□□ -0.25
NCAM1-222	ENST00000615285	ARID3C	A6NKF2	412 aa		13.49	□□□□□ -0.25
NCAM1-222	ENST00000615285	PDS5B	Q9NTI5	1447 aa		13.49	□□□□□ -0.25
NCAM1-222	ENST00000615285	CNGB1	Q14028	1251 aa	Predicted RBP	13.48	□□□□□ -0.25
NCAM1-222	ENST00000615285	GOLGA3	Q08378	1498 aa		13.45	□□□□□ -0.26
NCAM1-222	ENST00000615285	HRC	P23327	699 aa		13.45	□□□□□ -0.26
NCAM1-222	ENST00000615285	NEUROD1	Q13562	356 aa		13.44	□□□□□ -0.26
NCAM1-222	ENST00000615285	MTUS2	Q5JR59	1369 aa		13.43	□□□□□ -0.26
NCAM1-222	ENST00000615285	STAG3	Q9UJ98	1225 aa		13.43	□□□□□ -0.26
NCAM1-222	ENST00000615285	TSPY4	P0CV99	314 aa		13.42	□□□□□ -0.26
NCAM1-222	ENST00000615285	TSPY10	P0CW01	314 aa		13.42	□□□□□ -0.26
NCAM1-222	ENST00000615285	ZNF326	Q5BKZ1	582 aa	Known RBP	13.4	□□□□□ -0.26
NCAM1-222	ENST00000615285	NEFM	P07197	916 aa		13.39	□□□□□ -0.27
NCAM1-222	ENST00000615285	PLEKHD1	A6NEE1	506 aa		13.39	□□□□□ -0.27
NCAM1-222	ENST00000615285	CLIP1	P30622	1438 aa		13.38	□□□□□ -0.27
NCAM1-222	ENST00000615285	CEP164	Q9UPV0	1460 aa		13.38	□□□□□ -0.27
NCAM1-222	ENST00000615285	CECR2	Q9BXF3	1484 aa		13.36	□□□□□ -0.27
NCAM1-222	ENST00000615285	DAXX	Q9UER7	740 aa	Predicted RBP	13.32	□□□□□ -0.28
NCAM1-222	ENST00000615285	ANP32C	O43423	234 aa		13.31	□□□□□ -0.28
NCAM1-222	ENST00000615285	TOP2A	P11388	1531 aa	Known RBP	13.31	□□□□□ -0.28
NCAM1-222	ENST00000615285	TONSL	Q96HA7	1378 aa		13.28	□□□□□ -0.28
NCAM1-222	ENST00000615285	CHGA	P10645	457 aa	Known RBP	13.28	□□□□□ -0.28
NCAM1-222	ENST00000615285	MROH2B	Q7Z745	1585 aa		13.28	□□□□□ -0.28
NCAM1-222	ENST00000615285	FHAD1	B1AJZ9	1412 aa		13.25	□□□□□ -0.29
NCAM1-222	ENST00000615285	CUX2	O14529	1486 aa		13.25	□□□□□ -0.29
NCAM1-222	ENST00000615285	TNIK	Q9UKE5	1360 aa		13.24	□□□□□ -0.29
NCAM1-222	ENST00000615285	CARMIL2	Q6F5E8	1435 aa		13.24	□□□□□ -0.29
NCAM1-222	ENST00000615285	ABCC8	Q09428	1581 aa		13.24	□□□□□ -0.29
NCAM1-222	ENST00000615285	CCDC88B	A6NC98	1476 aa		13.24	□□□□□ -0.29
NCAM1-222	ENST00000615285	CADPS	Q9ULU8	1353 aa		13.23	□□□□□ -0.29
NCAM1-222	ENST00000615285	DIEXF	Q68CQ4	756 aa	Known RBP	13.23	□□□□□ -0.29
NCAM1-222	ENST00000615285	CARMIL1	Q5VZK9	1371 aa		13.22	□□□□□ -0.29
NCAM1-222	ENST00000615285	SMARCA4	P51532	1647 aa		13.22	□□□□□ -0.29
NCAM1-222	ENST00000615285	KCNH8	Q96L42	1107 aa		13.21	□□□□□ -0.29
NCAM1-222	ENST00000615285	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.21	□□□□□ -0.3
NCAM1-222	ENST00000615285	ATAD2B	Q9ULI0	1458 aa		13.2	□□□□□ -0.3
NCAM1-222	ENST00000615285	CEP162	Q5TB80	1403 aa		13.2	□□□□□ -0.3
NCAM1-222	ENST00000615285	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.2	□□□□□ -0.3
NCAM1-222	ENST00000615285	SOGA1	O94964	1423 aa		13.19	□□□□□ -0.3
NCAM1-222	ENST00000615285	EIF4G1	Q04637	1599 aa	Known RBP	13.19	□□□□□ -0.3
NCAM1-222	ENST00000615285	CFDP1	Q9UEE9	299 aa	Predicted RBP	13.17	□□□□□ -0.3

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