Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC100830.2-201ENST00000581636 240 ntBASIC8.46□□□□□ -1.06
RNF40O75150 PRR13P5-201ENST00000596581 442 ntBASIC8.46□□□□□ -1.06
RNF40O75150 ZNF83-209ENST00000596930 560 ntTSL 4 BASIC8.46□□□□□ -1.06
RNF40O75150 AC243960.4-201ENST00000600532 288 ntBASIC8.46□□□□□ -1.06
RNF40O75150 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
RNF40O75150 CU638689.4-203ENST00000625185 785 ntTSL 5 BASIC8.46□□□□□ -1.06
RNF40O75150 AC119674.1-207ENST00000641355 633 ntBASIC8.46□□□□□ -1.06
RNF40O75150 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
RNF40O75150 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
RNF40O75150 AC091046.3-201ENST00000631455 1574 ntBASIC8.46□□□□□ -1.06
RNF40O75150 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
RNF40O75150 PDXDC1-203ENST00000450288 4171 ntTSL 5 BASIC8.46□□□□□ -1.06
RNF40O75150 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
RNF40O75150 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
RNF40O75150 ZBTB20-AS1-203ENST00000475939 1687 ntTSL 2 BASIC8.46□□□□□ -1.06
RNF40O75150 SEPT4-211ENST00000579371 1362 ntTSL 5 BASIC8.46□□□□□ -1.06
RNF40O75150 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
RNF40O75150 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.06
RNF40O75150 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
RNF40O75150 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
RNF40O75150 MAP4-210ENST00000439356 2743 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
RNF40O75150 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC8.45□□□□□ -1.06
RNF40O75150 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
RNF40O75150 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC8.45□□□□□ -1.06
RNF40O75150 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
RNF40O75150 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC8.45□□□□□ -1.06
RNF40O75150 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
RNF40O75150 CLK1-215ENST00000621181 1843 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
RNF40O75150 MRAS-211ENST00000621127 3801 ntTSL 5 BASIC8.45□□□□□ -1.06
RNF40O75150 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
RNF40O75150 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
RNF40O75150 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
RNF40O75150 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
RNF40O75150 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
RNF40O75150 ST7-213ENST00000432298 1956 ntTSL 2 BASIC8.45□□□□□ -1.06
RNF40O75150 LEMD1-202ENST00000367151 869 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
RNF40O75150 LEMD1-204ENST00000367153 929 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
RNF40O75150 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC8.45□□□□□ -1.06
RNF40O75150 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
RNF40O75150 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
RNF40O75150 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
RNF40O75150 LEMD1-206ENST00000391936 727 ntTSL 5 BASIC8.45□□□□□ -1.06
RNF40O75150 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
RNF40O75150 HMGB3P18-201ENST00000406327 590 ntBASIC8.45□□□□□ -1.06
RNF40O75150 AL603766.1-201ENST00000407763 664 ntBASIC8.45□□□□□ -1.06
RNF40O75150 RN7SKP279-201ENST00000411383 298 ntBASIC8.45□□□□□ -1.06
RNF40O75150 AC211486.3-201ENST00000412694 621 ntBASIC8.45□□□□□ -1.06
RNF40O75150 AC003080.1-201ENST00000413552 767 ntBASIC8.45□□□□□ -1.06
RNF40O75150 AL592293.2-201ENST00000422292 996 ntBASIC8.45□□□□□ -1.06
RNF40O75150 RBMY2JP-201ENST00000425544 1059 ntBASIC8.45□□□□□ -1.06
RNF40O75150 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC8.45□□□□□ -1.06
RNF40O75150 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC8.45□□□□□ -1.06
RNF40O75150 HMGB1P45-201ENST00000435986 653 ntBASIC8.45□□□□□ -1.06
RNF40O75150 SUMO1P3-201ENST00000439961 304 ntBASIC8.45□□□□□ -1.06
RNF40O75150 AL121885.2-201ENST00000440255 819 ntTSL 3 BASIC8.45□□□□□ -1.06
RNF40O75150 RABEPKP1-201ENST00000440529 1026 ntBASIC8.45□□□□□ -1.06
RNF40O75150 AC123904.1-201ENST00000441072 368 ntBASIC8.45□□□□□ -1.06
RNF40O75150 LINC00460-203ENST00000444865 739 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
RNF40O75150 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC8.45□□□□□ -1.06
RNF40O75150 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC8.45□□□□□ -1.06
RNF40O75150 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC8.45□□□□□ -1.06
RNF40O75150 OR13C1P-201ENST00000457612 963 ntBASIC8.45□□□□□ -1.06
RNF40O75150 Y_RNA.632-201ENST00000459189 102 ntBASIC8.45□□□□□ -1.06
RNF40O75150 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC8.45□□□□□ -1.06
RNF40O75150 Y_RNA.711-201ENST00000516993 102 ntBASIC8.45□□□□□ -1.06
RNF40O75150 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC8.45□□□□□ -1.06
RNF40O75150 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC8.45□□□□□ -1.06
RNF40O75150 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC8.45□□□□□ -1.06
RNF40O75150 AC026111.1-201ENST00000551090 1195 ntBASIC8.45□□□□□ -1.06
RNF40O75150 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC8.45□□□□□ -1.06
RNF40O75150 RN7SL785P-201ENST00000578437 253 ntBASIC8.45□□□□□ -1.06
RNF40O75150 AC093826.2-201ENST00000579042 108 ntBASIC8.45□□□□□ -1.06
RNF40O75150 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC8.45□□□□□ -1.06
RNF40O75150 H3F3BP2-201ENST00000583907 357 ntBASIC8.45□□□□□ -1.06
RNF40O75150 AC020908.2-201ENST00000595134 405 ntTSL 2 BASIC8.45□□□□□ -1.06
RNF40O75150 AL162413.1-201ENST00000603198 110 ntBASIC8.45□□□□□ -1.06
RNF40O75150 AC004890.3-201ENST00000605566 1095 ntBASIC8.45□□□□□ -1.06
RNF40O75150 AL133215.3-201ENST00000609801 448 ntBASIC8.45□□□□□ -1.06
RNF40O75150 AC005609.2-201ENST00000623320 592 ntBASIC8.45□□□□□ -1.06
RNF40O75150 KLF8-206ENST00000640927 1150 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
RNF40O75150 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
RNF40O75150 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
RNF40O75150 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC8.45□□□□□ -1.06
RNF40O75150 AGBL4-203ENST00000371838 1353 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
RNF40O75150 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
RNF40O75150 KIDINS220-202ENST00000319688 3765 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
RNF40O75150 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
RNF40O75150 LRRC2-AS1-201ENST00000599511 2291 ntBASIC8.45□□□□□ -1.06
RNF40O75150 LIMS1-203ENST00000393310 4392 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
RNF40O75150 AC010200.1-201ENST00000547380 1454 ntBASIC8.45□□□□□ -1.06
RNF40O75150 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
RNF40O75150 AL008638.2-201ENST00000453934 2383 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
RNF40O75150 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
RNF40O75150 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC8.44□□□□□ -1.06
RNF40O75150 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC8.44□□□□□ -1.06
RNF40O75150 MED23-209ENST00000539158 1636 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
RNF40O75150 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC8.44□□□□□ -1.06
RNF40O75150 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC8.44□□□□□ -1.06
RNF40O75150 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
RNF40O75150 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms