RNA–Protein interactions for RNA: ENST00000373502.9

CHIC1-201, Transcript of cysteine rich hydrophobic domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHIC1, Length 4,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHIC1-201ENST00000373502 NISCHQ9Y2I1 1504 aa15.43■□□□□ 0.06
CHIC1-201ENST00000373502 DCAF8L2P0C7V8 631 aa14.33□□□□□ -0.12
CHIC1-201ENST00000373502 SHROOM4Q9ULL8 1493 aa13.35□□□□□ -0.27
CHIC1-201ENST00000373502 SUPT5HO00267 1087 aaKnown RBP13.31□□□□□ -0.28
CHIC1-201ENST00000373502 CCDC180Q9P1Z9 1646 aa13.22□□□□□ -0.29
CHIC1-201ENST00000373502 EHMT2Q96KQ7 1210 aa13.21□□□□□ -0.3
CHIC1-201ENST00000373502 ZCCHC6Q5VYS8 1495 aaKnown RBP13□□□□□ -0.33
CHIC1-201ENST00000373502 MYO15BQ96JP2 1530 aa12.76□□□□□ -0.37
CHIC1-201ENST00000373502 FAM9AQ8IZU1 332 aaPredicted RBP12.65□□□□□ -0.38
CHIC1-201ENST00000373502 TTBK1Q5TCY1 1321 aaPredicted RBP12.64□□□□□ -0.39
CHIC1-201ENST00000373502 DCAF1Q9Y4B6 1507 aa12.59□□□□□ -0.39
CHIC1-201ENST00000373502 ABCC9O60706 1549 aa12.59□□□□□ -0.39
CHIC1-201ENST00000373502 CHIC1Q5VXU3 224 aa12.54□□□□□ -0.4
CHIC1-201ENST00000373502 HRCP23327 699 aa12.51□□□□□ -0.41
CHIC1-201ENST00000373502 RANGAP1P46060 587 aaPredicted RBP12.5□□□□□ -0.41
CHIC1-201ENST00000373502 SCRIBQ14160 1630 aa12.44□□□□□ -0.42
CHIC1-201ENST00000373502 PPARGC1BQ86YN6 1023 aaKnown RBP12.4□□□□□ -0.42
CHIC1-201ENST00000373502 PCGF6Q9BYE7 350 aa12.37□□□□□ -0.43
CHIC1-201ENST00000373502 PABPN1Q86U42 306 aaKnown RBP eCLIP12.28□□□□□ -0.44
CHIC1-201ENST00000373502 NACADO15069 1562 aa12.26□□□□□ -0.45
CHIC1-201ENST00000373502 LOC105371045A0A1W2PR82 267 aa12.26□□□□□ -0.45
CHIC1-201ENST00000373502 CECR2Q9BXF3 1484 aa12.15□□□□□ -0.46
CHIC1-201ENST00000373502 RB1CC1Q8TDY2 1594 aa12.14□□□□□ -0.47
CHIC1-201ENST00000373502 UNC13AQ9UPW8 1703 aa12.14□□□□□ -0.47
CHIC1-201ENST00000373502 PELP1Q8IZL8 1130 aaKnown RBP12.12□□□□□ -0.47
CHIC1-201ENST00000373502 RSF1Q96T23 1441 aaPredicted RBP12.12□□□□□ -0.47
CHIC1-201ENST00000373502 ATP1B4Q9UN42 357 aaPredicted RBP12.08□□□□□ -0.48
CHIC1-201ENST00000373502 MROH2BQ7Z745 1585 aa12.05□□□□□ -0.48
CHIC1-201ENST00000373502 TRIM41Q8WV44 630 aa12.01□□□□□ -0.49
CHIC1-201ENST00000373502 WIZO95785 1651 aa11.99□□□□□ -0.49
CHIC1-201ENST00000373502 TRIM26Q12899 539 aaPredicted RBP11.97□□□□□ -0.49
CHIC1-201ENST00000373502 BICRAQ9NZM4 1560 aa11.96□□□□□ -0.49
CHIC1-201ENST00000373502 APLP2Q06481 763 aa11.91□□□□□ -0.5
CHIC1-201ENST00000373502 UBTFP17480 764 aaKnown RBP11.89□□□□□ -0.51
CHIC1-201ENST00000373502 MYT1Q01538 1121 aa11.83□□□□□ -0.52
CHIC1-201ENST00000373502 SMARCA4P51532 1647 aa11.83□□□□□ -0.52
CHIC1-201ENST00000373502 BAZ1AQ9NRL2 1556 aaPredicted RBP11.83□□□□□ -0.52
CHIC1-201ENST00000373502 CENPBP07199 599 aaPredicted RBP11.82□□□□□ -0.52
CHIC1-201ENST00000373502 CCER1Q8TC90 406 aaPredicted RBP11.8□□□□□ -0.52
CHIC1-201ENST00000373502 YTHDC1Q96MU7 727 aaKnown RBP11.8□□□□□ -0.52
CHIC1-201ENST00000373502 SCAF1Q9H7N4 1312 aaKnown RBP11.8□□□□□ -0.52
CHIC1-201ENST00000373502 ERICH6Q7L0X2 663 aa11.77□□□□□ -0.53
CHIC1-201ENST00000373502 ITGAEP38570 1179 aa11.76□□□□□ -0.53
CHIC1-201ENST00000373502 CNGB1Q14028 1251 aaPredicted RBP11.7□□□□□ -0.54
CHIC1-201ENST00000373502 TOP2AP11388 1531 aaKnown RBP11.69□□□□□ -0.54
CHIC1-201ENST00000373502 EIF4G1Q04637 1599 aaKnown RBP11.69□□□□□ -0.54
CHIC1-201ENST00000373502 CCDC88BA6NC98 1476 aa11.69□□□□□ -0.54
CHIC1-201ENST00000373502 SMARCA2P51531 1590 aa11.68□□□□□ -0.54
CHIC1-201ENST00000373502 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.65□□□□□ -0.54
CHIC1-201ENST00000373502 HNRNPUL2Q1KMD3 747 aaKnown RBP11.65□□□□□ -0.54
CHIC1-201ENST00000373502 ZEB1P37275 1124 aaPredicted RBP11.64□□□□□ -0.55
CHIC1-201ENST00000373502 ABCC8Q09428 1581 aa11.62□□□□□ -0.55
CHIC1-201ENST00000373502 ARID3CA6NKF2 412 aa11.61□□□□□ -0.55
CHIC1-201ENST00000373502 FBLN2P98095 1184 aa11.61□□□□□ -0.55
CHIC1-201ENST00000373502 PEG3Q9GZU2 1588 aa11.59□□□□□ -0.55
CHIC1-201ENST00000373502 ATAD2BQ9ULI0 1458 aa11.59□□□□□ -0.55
CHIC1-201ENST00000373502 NEUROD1Q13562 356 aa11.53□□□□□ -0.56
CHIC1-201ENST00000373502 MYT1LQ9UL68 1186 aa11.51□□□□□ -0.57
CHIC1-201ENST00000373502 BAZ1BQ9UIG0 1483 aaKnown RBP11.5□□□□□ -0.57
CHIC1-201ENST00000373502 P3H3Q8IVL6 736 aa11.49□□□□□ -0.57
CHIC1-201ENST00000373502 POLR3GLQ9BT43 218 aa11.47□□□□□ -0.57
CHIC1-201ENST00000373502 ACIN1Q9UKV3 1341 aaKnown RBP11.45□□□□□ -0.58
CHIC1-201ENST00000373502 NEFLP07196 543 aa11.45□□□□□ -0.58
CHIC1-201ENST00000373502 RUSC2Q8N2Y8 1516 aa11.44□□□□□ -0.58
CHIC1-201ENST00000373502 SOGA1O94964 1423 aa11.42□□□□□ -0.58
CHIC1-201ENST00000373502 WRNQ14191 1432 aaPredicted RBP eCLIP11.41□□□□□ -0.58
CHIC1-201ENST00000373502 SYNJ1O43426 1573 aa11.39□□□□□ -0.59
CHIC1-201ENST00000373502 NCAPD3P42695 1498 aa11.38□□□□□ -0.59
CHIC1-201ENST00000373502 CEP162Q5TB80 1403 aa11.37□□□□□ -0.59
CHIC1-201ENST00000373502 DIEXFQ68CQ4 756 aaKnown RBP11.36□□□□□ -0.59
CHIC1-201ENST00000373502 GTF3C3Q9Y5Q9 886 aa11.36□□□□□ -0.59
CHIC1-201ENST00000373502 HMGXB3Q12766 1538 aa11.34□□□□□ -0.59
CHIC1-201ENST00000373502 CC2D2AQ9P2K1 1620 aa11.34□□□□□ -0.59
CHIC1-201ENST00000373502 DNAJC5BQ9UF47 199 aa11.32□□□□□ -0.6
CHIC1-201ENST00000373502 PLPPR3Q6T4P5 718 aa11.28□□□□□ -0.6
CHIC1-201ENST00000373502 TNIKQ9UKE5 1360 aa11.28□□□□□ -0.6
CHIC1-201ENST00000373502 CFTRP13569 1480 aa11.23□□□□□ -0.61
CHIC1-201ENST00000373502 FAM50AQ14320 339 aaKnown RBP11.22□□□□□ -0.61
CHIC1-201ENST00000373502 CUX1P39880 1505 aa11.22□□□□□ -0.61
CHIC1-201ENST00000373502 SENP3Q9H4L4 574 aaPredicted RBP11.22□□□□□ -0.61
CHIC1-201ENST00000373502 TOP2BQ02880 1626 aa11.21□□□□□ -0.61
CHIC1-201ENST00000373502 CSRNP3Q8WYN3 585 aa11.21□□□□□ -0.61
CHIC1-201ENST00000373502 ZNF316A6NFI3 1004 aaPredicted RBP11.19□□□□□ -0.62
CHIC1-201ENST00000373502 MIER1Q8N108 512 aa11.19□□□□□ -0.62
CHIC1-201ENST00000373502 BIVM-ERCC5R4GMW8 1640 aa11.19□□□□□ -0.62
CHIC1-201ENST00000373502 NESP48681 1621 aa11.18□□□□□ -0.62
CHIC1-201ENST00000373502 BCANQ96GW7 911 aa11.16□□□□□ -0.62
CHIC1-201ENST00000373502 GOLGA3Q08378 1498 aa11.15□□□□□ -0.62
CHIC1-201ENST00000373502 CADPSQ9ULU8 1353 aa11.14□□□□□ -0.63
CHIC1-201ENST00000373502 KIF21BO75037 1637 aa11.14□□□□□ -0.63
CHIC1-201ENST00000373502 RAPGEF2Q9Y4G8 1499 aa11.13□□□□□ -0.63
CHIC1-201ENST00000373502 ZNF326Q5BKZ1 582 aaKnown RBP11.13□□□□□ -0.63
CHIC1-201ENST00000373502 PRDM2Q13029 1718 aa11.13□□□□□ -0.63
CHIC1-201ENST00000373502 EEA1Q15075 1411 aa11.12□□□□□ -0.63
CHIC1-201ENST00000373502 ZNF777Q9ULD5 760 aaPredicted RBP11.12□□□□□ -0.63
CHIC1-201ENST00000373502 CLIP1P30622 1438 aa11.11□□□□□ -0.63
CHIC1-201ENST00000373502 DAXXQ9UER7 740 aaPredicted RBP11.1□□□□□ -0.63
CHIC1-201ENST00000373502 SLC4A1APQ9BWU0 796 aaKnown RBP11.1□□□□□ -0.63
CHIC1-201ENST00000373502 TRIM52Q96A61 297 aa11.07□□□□□ -0.64
CHIC1-201ENST00000373502 VPS8Q8N3P4 1428 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 150.8 ms