RNA–Protein interactions for RNA: ENST00000379141.8

LRIG3-202, Transcript of leucine rich repeats and immunoglobulin like domains 3, humanhuman

TSL 1 (best) BASIC

Gene LRIG3, Length 3,667 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIG3-202ENST00000379141 NISCHQ9Y2I1 1504 aa15.44■□□□□ 0.06
LRIG3-202ENST00000379141 CCDC180Q9P1Z9 1646 aa13.18□□□□□ -0.3
LRIG3-202ENST00000379141 SLC24A1O60721 1099 aa13.16□□□□□ -0.3
LRIG3-202ENST00000379141 ZCCHC6Q5VYS8 1495 aaKnown RBP13.16□□□□□ -0.3
LRIG3-202ENST00000379141 DCAF8L2P0C7V8 631 aa12.99□□□□□ -0.33
LRIG3-202ENST00000379141 PELP1Q8IZL8 1130 aaKnown RBP12.99□□□□□ -0.33
LRIG3-202ENST00000379141 MYT1Q01538 1121 aa12.98□□□□□ -0.33
LRIG3-202ENST00000379141 SHROOM4Q9ULL8 1493 aa12.96□□□□□ -0.34
LRIG3-202ENST00000379141 MYO15BQ96JP2 1530 aa12.86□□□□□ -0.35
LRIG3-202ENST00000379141 DCAF1Q9Y4B6 1507 aa12.81□□□□□ -0.36
LRIG3-202ENST00000379141 SUPT5HO00267 1087 aaKnown RBP12.74□□□□□ -0.37
LRIG3-202ENST00000379141 CHIC1Q5VXU3 224 aa12.7□□□□□ -0.38
LRIG3-202ENST00000379141 HRCP23327 699 aa12.66□□□□□ -0.38
LRIG3-202ENST00000379141 PRKCSHP14314 528 aaPredicted RBP12.63□□□□□ -0.39
LRIG3-202ENST00000379141 TTBK1Q5TCY1 1321 aaPredicted RBP12.61□□□□□ -0.39
LRIG3-202ENST00000379141 ABCC9O60706 1549 aa12.49□□□□□ -0.41
LRIG3-202ENST00000379141 ERICH6Q7L0X2 663 aa12.39□□□□□ -0.43
LRIG3-202ENST00000379141 PCGF6Q9BYE7 350 aa12.36□□□□□ -0.43
LRIG3-202ENST00000379141 APLP2Q06481 763 aa12.28□□□□□ -0.44
LRIG3-202ENST00000379141 PPARGC1BQ86YN6 1023 aaKnown RBP12.26□□□□□ -0.45
LRIG3-202ENST00000379141 RSF1Q96T23 1441 aaPredicted RBP12.25□□□□□ -0.45
LRIG3-202ENST00000379141 DAXXQ9UER7 740 aaPredicted RBP12.24□□□□□ -0.45
LRIG3-202ENST00000379141 RB1CC1Q8TDY2 1594 aa12.22□□□□□ -0.45
LRIG3-202ENST00000379141 LOC105371045A0A1W2PR82 267 aa12.22□□□□□ -0.45
LRIG3-202ENST00000379141 TRIM26Q12899 539 aaPredicted RBP12.18□□□□□ -0.46
LRIG3-202ENST00000379141 SCRIBQ14160 1630 aa12.17□□□□□ -0.46
LRIG3-202ENST00000379141 EIF4G1Q04637 1599 aaKnown RBP12.1□□□□□ -0.47
LRIG3-202ENST00000379141 NACADO15069 1562 aa12.02□□□□□ -0.49
LRIG3-202ENST00000379141 MROH2BQ7Z745 1585 aa11.99□□□□□ -0.49
LRIG3-202ENST00000379141 ZEB1P37275 1124 aaPredicted RBP11.98□□□□□ -0.49
LRIG3-202ENST00000379141 BAZ1AQ9NRL2 1556 aaPredicted RBP11.98□□□□□ -0.49
LRIG3-202ENST00000379141 WIZO95785 1651 aa11.96□□□□□ -0.49
LRIG3-202ENST00000379141 CECR2Q9BXF3 1484 aa11.96□□□□□ -0.5
LRIG3-202ENST00000379141 TRIM41Q8WV44 630 aa11.91□□□□□ -0.5
LRIG3-202ENST00000379141 PABPN1Q86U42 306 aaKnown RBP eCLIP11.89□□□□□ -0.51
LRIG3-202ENST00000379141 BCL11AQ9H165 835 aa11.86□□□□□ -0.51
LRIG3-202ENST00000379141 WRNQ14191 1432 aaPredicted RBP eCLIP11.81□□□□□ -0.52
LRIG3-202ENST00000379141 TOP2AP11388 1531 aaKnown RBP11.8□□□□□ -0.52
LRIG3-202ENST00000379141 EIF5BO60841 1220 aaKnown RBP11.8□□□□□ -0.52
LRIG3-202ENST00000379141 SCAF1Q9H7N4 1312 aaKnown RBP11.79□□□□□ -0.52
LRIG3-202ENST00000379141 UNC13AQ9UPW8 1703 aa11.78□□□□□ -0.52
LRIG3-202ENST00000379141 SMARCA2P51531 1590 aa11.76□□□□□ -0.53
LRIG3-202ENST00000379141 SMARCA4P51532 1647 aa11.75□□□□□ -0.53
LRIG3-202ENST00000379141 FAM9AQ8IZU1 332 aaPredicted RBP11.7□□□□□ -0.54
LRIG3-202ENST00000379141 EHMT2Q96KQ7 1210 aa11.7□□□□□ -0.54
LRIG3-202ENST00000379141 ABCC8Q09428 1581 aa11.7□□□□□ -0.54
LRIG3-202ENST00000379141 CCDC88BA6NC98 1476 aa11.69□□□□□ -0.54
LRIG3-202ENST00000379141 PEG3Q9GZU2 1588 aa11.64□□□□□ -0.55
LRIG3-202ENST00000379141 CEP162Q5TB80 1403 aa11.63□□□□□ -0.55
LRIG3-202ENST00000379141 TNIKQ9UKE5 1360 aa11.62□□□□□ -0.55
LRIG3-202ENST00000379141 EEA1Q15075 1411 aa11.61□□□□□ -0.55
LRIG3-202ENST00000379141 PLPPR3Q6T4P5 718 aa11.61□□□□□ -0.55
LRIG3-202ENST00000379141 SOGA1O94964 1423 aa11.58□□□□□ -0.56
LRIG3-202ENST00000379141 ACIN1Q9UKV3 1341 aaKnown RBP11.58□□□□□ -0.56
LRIG3-202ENST00000379141 PLEKHG5O94827 1062 aa11.57□□□□□ -0.56
LRIG3-202ENST00000379141 KIF21BO75037 1637 aa11.57□□□□□ -0.56
LRIG3-202ENST00000379141 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.56□□□□□ -0.56
LRIG3-202ENST00000379141 RUSC2Q8N2Y8 1516 aa11.54□□□□□ -0.56
LRIG3-202ENST00000379141 NCBP3Q53F19 620 aaKnown RBP11.54□□□□□ -0.56
LRIG3-202ENST00000379141 NEUROD1Q13562 356 aa11.53□□□□□ -0.56
LRIG3-202ENST00000379141 BICRAQ9NZM4 1560 aa11.53□□□□□ -0.56
LRIG3-202ENST00000379141 RTN4Q9NQC3 1192 aaKnown RBP11.51□□□□□ -0.57
LRIG3-202ENST00000379141 GOLGA3Q08378 1498 aa11.51□□□□□ -0.57
LRIG3-202ENST00000379141 SYNJ1O43426 1573 aa11.5□□□□□ -0.57
LRIG3-202ENST00000379141 CCER1Q8TC90 406 aaPredicted RBP11.49□□□□□ -0.57
LRIG3-202ENST00000379141 DIEXFQ68CQ4 756 aaKnown RBP11.46□□□□□ -0.57
LRIG3-202ENST00000379141 BAZ1BQ9UIG0 1483 aaKnown RBP11.44□□□□□ -0.58
LRIG3-202ENST00000379141 CEP164Q9UPV0 1460 aa11.43□□□□□ -0.58
LRIG3-202ENST00000379141 CSRNP3Q8WYN3 585 aa11.42□□□□□ -0.58
LRIG3-202ENST00000379141 BIVM-ERCC5R4GMW8 1640 aa11.39□□□□□ -0.59
LRIG3-202ENST00000379141 VPS8Q8N3P4 1428 aa11.38□□□□□ -0.59
LRIG3-202ENST00000379141 TOP2BQ02880 1626 aa11.37□□□□□ -0.59
LRIG3-202ENST00000379141 GTF3C3Q9Y5Q9 886 aa11.37□□□□□ -0.59
LRIG3-202ENST00000379141 ZNF316A6NFI3 1004 aaPredicted RBP11.36□□□□□ -0.59
LRIG3-202ENST00000379141 CLIP1P30622 1438 aa11.36□□□□□ -0.59
LRIG3-202ENST00000379141 CENPBP07199 599 aaPredicted RBP11.35□□□□□ -0.59
LRIG3-202ENST00000379141 RANGAP1P46060 587 aaPredicted RBP11.34□□□□□ -0.59
LRIG3-202ENST00000379141 ERICH3Q5RHP9 1530 aa11.33□□□□□ -0.6
LRIG3-202ENST00000379141 ATAD2BQ9ULI0 1458 aa11.32□□□□□ -0.6
LRIG3-202ENST00000379141 RAPGEF2Q9Y4G8 1499 aa11.32□□□□□ -0.6
LRIG3-202ENST00000379141 KLHL34Q8N239 644 aa11.32□□□□□ -0.6
LRIG3-202ENST00000379141 TIMELESSQ9UNS1 1208 aa11.29□□□□□ -0.6
LRIG3-202ENST00000379141 PODXL2Q9NZ53 605 aa11.28□□□□□ -0.6
LRIG3-202ENST00000379141 CUX2O14529 1486 aa11.28□□□□□ -0.6
LRIG3-202ENST00000379141 PRXQ9BXM0 1461 aa11.27□□□□□ -0.61
LRIG3-202ENST00000379141 ARAP1Q96P48 1450 aa11.26□□□□□ -0.61
LRIG3-202ENST00000379141 UBTFP17480 764 aaKnown RBP11.24□□□□□ -0.61
LRIG3-202ENST00000379141 CLSPNQ9HAW4 1339 aa11.23□□□□□ -0.61
LRIG3-202ENST00000379141 ARXQ96QS3 562 aa11.22□□□□□ -0.61
LRIG3-202ENST00000379141 MIER1Q8N108 512 aa11.22□□□□□ -0.61
LRIG3-202ENST00000379141 RRBP1Q9P2E9 1410 aaKnown RBP11.21□□□□□ -0.61
LRIG3-202ENST00000379141 DHX57Q6P158 1386 aaKnown RBP11.2□□□□□ -0.62
LRIG3-202ENST00000379141 PRDM2Q13029 1718 aa11.2□□□□□ -0.62
LRIG3-202ENST00000379141 HMGXB3Q12766 1538 aa11.18□□□□□ -0.62
LRIG3-202ENST00000379141 CUX1P39880 1505 aa11.16□□□□□ -0.62
LRIG3-202ENST00000379141 MAP3K1Q13233 1512 aa11.12□□□□□ -0.63
LRIG3-202ENST00000379141 TULP1O00294 542 aaPredicted RBP11.12□□□□□ -0.63
LRIG3-202ENST00000379141 HNRNPUL2Q1KMD3 747 aaKnown RBP11.12□□□□□ -0.63
LRIG3-202ENST00000379141 MAPKBP1O60336 1514 aa11.1□□□□□ -0.63
LRIG3-202ENST00000379141 NCAPD3P42695 1498 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms