RNA–Protein interactions for RNA: ENST00000456103.1

LINC00533-201, long intergenic non-protein coding RNA 533, humanhuman

TSL 3 BASIC

Gene LINC00533, Length 537 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00533-201ENST00000456103 AEBP2Q6ZN18 517 aaPredicted RBP20.21■□□□□ 0.83
LINC00533-201ENST00000456103 CHIC1Q5VXU3 224 aa19.78■□□□□ 0.76
LINC00533-201ENST00000456103 PHF23Q9BUL5 403 aaPredicted RBP17.38■□□□□ 0.37
LINC00533-201ENST00000456103 NISCHQ9Y2I1 1504 aa17.22■□□□□ 0.35
LINC00533-201ENST00000456103 SENP3Q9H4L4 574 aaPredicted RBP17.18■□□□□ 0.34
LINC00533-201ENST00000456103 PLPPR3Q6T4P5 718 aa16.08■□□□□ 0.16
LINC00533-201ENST00000456103 FOXD1Q16676 465 aa15.91■□□□□ 0.14
LINC00533-201ENST00000456103 PPP6R1Q9UPN7 881 aa15.31■□□□□ 0.04
LINC00533-201ENST00000456103 ADRA2BP18089 450 aa15.28■□□□□ 0.04
LINC00533-201ENST00000456103 CCDC180Q9P1Z9 1646 aa15.14■□□□□ 0.01
LINC00533-201ENST00000456103 PIAS4Q8N2W9 510 aaPredicted RBP15□□□□□ -0.01
LINC00533-201ENST00000456103 MSH5O43196 834 aa14.7□□□□□ -0.06
LINC00533-201ENST00000456103 ABCC9O60706 1549 aa14.59□□□□□ -0.07
LINC00533-201ENST00000456103 ZCCHC6Q5VYS8 1495 aaKnown RBP14.39□□□□□ -0.11
LINC00533-201ENST00000456103 DCAF8L2P0C7V8 631 aa14.3□□□□□ -0.12
LINC00533-201ENST00000456103 DCAF1Q9Y4B6 1507 aa14.27□□□□□ -0.12
LINC00533-201ENST00000456103 MYO15BQ96JP2 1530 aa14.23□□□□□ -0.13
LINC00533-201ENST00000456103 NACADO15069 1562 aa14.22□□□□□ -0.13
LINC00533-201ENST00000456103 RB1CC1Q8TDY2 1594 aa14.15□□□□□ -0.14
LINC00533-201ENST00000456103 PPP4R3CPQ6ZMV5 832 aa14.15□□□□□ -0.14
LINC00533-201ENST00000456103 SCAF1Q9H7N4 1312 aaKnown RBP14.04□□□□□ -0.16
LINC00533-201ENST00000456103 MAPK8IP2Q13387 824 aaPredicted RBP13.86□□□□□ -0.19
LINC00533-201ENST00000456103 SCRIBQ14160 1630 aa13.84□□□□□ -0.19
LINC00533-201ENST00000456103 KCNA4P22459 653 aa13.82□□□□□ -0.2
LINC00533-201ENST00000456103 NCBP3Q53F19 620 aaKnown RBP13.8□□□□□ -0.2
LINC00533-201ENST00000456103 UNC13AQ9UPW8 1703 aa13.78□□□□□ -0.2
LINC00533-201ENST00000456103 CNKSR2Q8WXI2 1034 aa13.77□□□□□ -0.21
LINC00533-201ENST00000456103 SHROOM4Q9ULL8 1493 aa13.76□□□□□ -0.21
LINC00533-201ENST00000456103 BICRAQ9NZM4 1560 aa13.71□□□□□ -0.21
LINC00533-201ENST00000456103 PABPN1Q86U42 306 aaKnown RBP eCLIP13.71□□□□□ -0.21
LINC00533-201ENST00000456103 DMRT2Q9Y5R5 561 aa13.71□□□□□ -0.21
LINC00533-201ENST00000456103 NPM3O75607 178 aaKnown RBP13.59□□□□□ -0.23
LINC00533-201ENST00000456103 RNF216Q9NWF9 866 aaPredicted RBP13.5□□□□□ -0.25
LINC00533-201ENST00000456103 HOXD11P31277 338 aaPredicted RBP13.45□□□□□ -0.26
LINC00533-201ENST00000456103 CECR2Q9BXF3 1484 aa13.4□□□□□ -0.26
LINC00533-201ENST00000456103 POTEDQ86YR6 584 aa13.33□□□□□ -0.28
LINC00533-201ENST00000456103 EIF4G1Q04637 1599 aaKnown RBP13.32□□□□□ -0.28
LINC00533-201ENST00000456103 BAZ1AQ9NRL2 1556 aaPredicted RBP13.32□□□□□ -0.28
LINC00533-201ENST00000456103 MROH2BQ7Z745 1585 aa13.28□□□□□ -0.28
LINC00533-201ENST00000456103 SMARCA4P51532 1647 aa13.28□□□□□ -0.28
LINC00533-201ENST00000456103 DNAJC5BQ9UF47 199 aa13.26□□□□□ -0.29
LINC00533-201ENST00000456103 RSF1Q96T23 1441 aaPredicted RBP13.23□□□□□ -0.29
LINC00533-201ENST00000456103 CC2D2AQ9P2K1 1620 aa13.2□□□□□ -0.3
LINC00533-201ENST00000456103 ATAD2BQ9ULI0 1458 aa13.17□□□□□ -0.3
LINC00533-201ENST00000456103 SLC4A1APQ9BWU0 796 aaKnown RBP13.17□□□□□ -0.3
LINC00533-201ENST00000456103 PEG3Q9GZU2 1588 aa13.16□□□□□ -0.3
LINC00533-201ENST00000456103 SMARCA2P51531 1590 aa13.15□□□□□ -0.3
LINC00533-201ENST00000456103 NCAPD3P42695 1498 aa13.14□□□□□ -0.31
LINC00533-201ENST00000456103 WIZO95785 1651 aa13.12□□□□□ -0.31
LINC00533-201ENST00000456103 SUPT5HO00267 1087 aaKnown RBP13.11□□□□□ -0.31
LINC00533-201ENST00000456103 BAZ1BQ9UIG0 1483 aaKnown RBP13.06□□□□□ -0.32
LINC00533-201ENST00000456103 DCAF8L1A6NGE4 600 aa13.06□□□□□ -0.32
LINC00533-201ENST00000456103 HMGXB3Q12766 1538 aa13.06□□□□□ -0.32
LINC00533-201ENST00000456103 TOP2AP11388 1531 aaKnown RBP13.01□□□□□ -0.33
LINC00533-201ENST00000456103 CCDC88BA6NC98 1476 aa12.88□□□□□ -0.35
LINC00533-201ENST00000456103 SLC4A2P04920 1241 aa12.82□□□□□ -0.36
LINC00533-201ENST00000456103 EHMT2Q96KQ7 1210 aa12.79□□□□□ -0.36
LINC00533-201ENST00000456103 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.78□□□□□ -0.36
LINC00533-201ENST00000456103 CADPSQ9ULU8 1353 aa12.77□□□□□ -0.37
LINC00533-201ENST00000456103 FOXD4L1Q9NU39 408 aa12.75□□□□□ -0.37
LINC00533-201ENST00000456103 CFTRP13569 1480 aa12.74□□□□□ -0.37
LINC00533-201ENST00000456103 ZBTB22O15209 634 aa12.72□□□□□ -0.37
LINC00533-201ENST00000456103 NESP48681 1621 aa12.71□□□□□ -0.37
LINC00533-201ENST00000456103 LAMC3Q9Y6N6 1575 aa12.71□□□□□ -0.37
LINC00533-201ENST00000456103 CSRNP3Q8WYN3 585 aa12.67□□□□□ -0.38
LINC00533-201ENST00000456103 PDS5BQ9NTI5 1447 aa12.64□□□□□ -0.39
LINC00533-201ENST00000456103 FANCD2Q9BXW9 1451 aa12.6□□□□□ -0.39
LINC00533-201ENST00000456103 RNF39Q9H2S5 420 aa12.59□□□□□ -0.39
LINC00533-201ENST00000456103 U3KPZ7 1027 aaPredicted RBP12.59□□□□□ -0.39
LINC00533-201ENST00000456103 PRDM2Q13029 1718 aa12.58□□□□□ -0.4
LINC00533-201ENST00000456103 MYCNP04198 464 aaPredicted RBP12.57□□□□□ -0.4
LINC00533-201ENST00000456103 ERCC6Q03468 1493 aa12.54□□□□□ -0.4
LINC00533-201ENST00000456103 CEP164Q9UPV0 1460 aa12.54□□□□□ -0.4
LINC00533-201ENST00000456103 KIF21AQ7Z4S6 1674 aa12.51□□□□□ -0.41
LINC00533-201ENST00000456103 MRC2Q9UBG0 1479 aa12.47□□□□□ -0.41
LINC00533-201ENST00000456103 WRNQ14191 1432 aaPredicted RBP eCLIP12.46□□□□□ -0.41
LINC00533-201ENST00000456103 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.46□□□□□ -0.41
LINC00533-201ENST00000456103 HNRNPUL2Q1KMD3 747 aaKnown RBP12.46□□□□□ -0.41
LINC00533-201ENST00000456103 ABCC8Q09428 1581 aa12.46□□□□□ -0.42
LINC00533-201ENST00000456103 C1QBPQ07021 282 aaKnown RBP12.45□□□□□ -0.42
LINC00533-201ENST00000456103 URB2Q14146 1524 aaKnown RBP12.45□□□□□ -0.42
LINC00533-201ENST00000456103 THOC2Q8NI27 1593 aaKnown RBP12.43□□□□□ -0.42
LINC00533-201ENST00000456103 WDR62O43379 1518 aa12.42□□□□□ -0.42
LINC00533-201ENST00000456103 CUX1P39880 1505 aa12.42□□□□□ -0.42
LINC00533-201ENST00000456103 TOPBP1Q92547 1522 aa12.42□□□□□ -0.42
LINC00533-201ENST00000456103 DNMBPQ6XZF7 1577 aa12.42□□□□□ -0.42
LINC00533-201ENST00000456103 SAMD1Q6SPF0 538 aaPredicted RBP12.41□□□□□ -0.42
LINC00533-201ENST00000456103 SYNJ1O43426 1573 aa12.39□□□□□ -0.43
LINC00533-201ENST00000456103 TOP2BQ02880 1626 aa12.39□□□□□ -0.43
LINC00533-201ENST00000456103 TRIM41Q8WV44 630 aa12.38□□□□□ -0.43
LINC00533-201ENST00000456103 BIVM-ERCC5R4GMW8 1640 aa12.37□□□□□ -0.43
LINC00533-201ENST00000456103 FGD5Q6ZNL6 1462 aa12.34□□□□□ -0.43
LINC00533-201ENST00000456103 APLP2Q06481 763 aa12.34□□□□□ -0.43
LINC00533-201ENST00000456103 POLA1P09884 1462 aaPredicted RBP12.34□□□□□ -0.43
LINC00533-201ENST00000456103 ATXN8OSP0DMR3 200 aa12.33□□□□□ -0.44
LINC00533-201ENST00000456103 CUX2O14529 1486 aa12.33□□□□□ -0.44
LINC00533-201ENST00000456103 SOGA1O94964 1423 aa12.32□□□□□ -0.44
LINC00533-201ENST00000456103 IFT140Q96RY7 1462 aa12.28□□□□□ -0.44
LINC00533-201ENST00000456103 RAD54L2Q9Y4B4 1467 aa12.28□□□□□ -0.44
LINC00533-201ENST00000456103 TARBP1Q13395 1621 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 155.1 ms